Dichomitus squalens: DICSQDRAFT_49946
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Entry
DICSQDRAFT_49946 CDS
T03133
Name
(RefSeq) Vps54-domain-containing protein
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsq01009
]
DICSQDRAFT_49946
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsq04131
]
DICSQDRAFT_49946
Protein phosphatases and associated proteins [BR:
dsq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
DICSQDRAFT_49946
Membrane trafficking [BR:
dsq04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
DICSQDRAFT_49946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
18842213
NCBI-ProteinID:
XP_007361539
JGI:
49946
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MSDYSSTPSRPASPIGVLPVFAASRSYRFNYDQRRPGPGSVSETTEGRGDFLGAGAPFDV
FGNASVTSLAQGTLPADWSSSKHGFNAISNVVNNPHKKSAPPKAHSALPAVPPADLPRVR
RKDFESYLRAITPEWERFLQNAEQGRDGFAQIDDAAHSANLSAGIEVPPTPRTPRTPRPP
AGKALPPLETVPAVFFEREFNLGDPRTFNAVTEQEGDEEEWSDLSSLSYSLPLLEKFSHY
ADTIEQHLIREISIRSTSFFAALANLQDLQTESEQCLDRISHLRGLLKDVDEKGAKRGLE
IVRKEGKMRNLGNVNKGVKFVGGVMEMTGIAKSLVGAGQWGEALDMIEELERLYHGDTAQ
ATPIPSPQPTPSKNGRASPLPTVMESPPATPPPPPPPPEPSIPLSSLRAFAALPEHLRTL
TMEITSSLTSEFVSLLRHDLVERIDSNQHTWSETRKSDFNMSLRDRLRPLLQSLLRTKGI
LEATLSWREVVMAEVGSTIKRRIPSLEIGDDSIPPQSNAAAELRAMTHPAFMDLARGMYR
SLLNCIEGLHRQGAIVIEVVQSIQPQKTPVDITALQEELTDILSSAAESANARASKVISI
RAEQHTALDLPSFCELFNESWDFVVKSEVICRRMIVGLRGTIVSQAKSFLQHFHQAQLNQ
SAKLVEDEQWNAAEVAPSVQRAVDTVVDASISDPPELLFNRPPQDLLSPLPPTSPQPPSP
SLTANGGPRPSSPLPSPNFPPSPGRSQRRRSANAPTKHLRVEERAYFAVSATLDVLVLLL
DYLKVIVNLPLLTIDTMSRIIELLKSFNSRTCQVVLGAGAMRSAGLKNITAKHLALASQS
LAIMISLIPYIRETFRRHLSQKQAVMLIEFDKLKRDYQEHQNEIHAKLIAIMGDRLTAHI
RTLQVRLPPGYRSPAHS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactactcgtcgactccctcgcgtcccgcttcgcccattggagtgcttcctgtg
tttgccgcatcccgctcgtacaggttcaactacgaccaacggcgcccaggcccaggaagt
gtctcagaaaccactgaagggagaggagacttccttggtgctggtgcaccatttgatgtc
ttcggcaacgcctccgtaacttccctggcccagggtacccttccagcggactggagtagc
tccaaacacggcttcaatgctatctccaatgtggtgaacaatccgcacaagaagtctgca
ccgcccaaggcccactccgcgctccccgctgtgcctccagccgacctcccgcgtgtgcgc
cggaaagacttcgagtcctacctgcgcgctatcactccagagtgggagcggtttctccaa
aatgccgaacagggccgagatggctttgcccagatagacgatgccgcacattcagcaaac
ttgtcggcaggcatagaggtaccgccaactccccggaccccacgcacaccgcggccaccg
gccggaaaggcgctgcctccgttagagaccgtccctgccgtgtttttcgaacgcgagttc
aatctgggcgacccgcgtacgtttaatgccgtgactgagcaggaaggggacgaagaggag
tggtccgacctctcttccctctcgtactccctcccattgcttgagaagttctcccactac
gcggacaccatcgagcagcacctcatccgcgagatctcgattcggtctacttccttcttt
gctgcgcttgcgaacctccaagaccttcagaccgagtctgaacaatgtctggaccgcata
tctcacctgaggggtctcctgaaggacgtagacgagaagggcgcgaaacgcgggctggag
atcgtgcgcaaagagggcaagatgcggaacctgggcaacgtcaacaaaggcgtgaagttc
gttggaggtgtaatggagatgaccggcatcgcgaagagcttggtcggggccggtcagtgg
ggagaggctttggacatgattgaggagctggaacggctctaccatggggacacggctcaa
gctaccccgatcccttcaccacagcctaccccgtcgaagaacggtcgcgcttcccccttg
cctacggtcatggaatcgcctccagcaacgccgccacccccgcctcctcctccggagccc
tcaataccactgtcttcgctaagggcgtttgctgcgctcccggagcacctacggacgttg
actatggagatcacgtcttcgctgacttccgagttcgttagccttttgcgtcacgacctt
gtagagcggatcgactcgaaccagcacacatggtcggaaacgaggaagagcgacttcaac
atgtccctacgagatcgactacgacccttgcttcagtctcttctgcgtacgaaaggtatc
cttgaggcgactctatcatggcgagaggtagtcatggcagaagtgggaagtacaatcaag
cggcgaataccttcgctcgaaattggcgacgactcgataccacctcagtccaatgcggcg
gccgagctgcgcgccatgacacatcccgcgttcatggacctcgcccggggaatgtaccga
agtctcctgaactgcatagagggtctgcaccggcaaggcgcgatcgtcatagaagtcgtc
cagagcatccaacctcaaaagactcctgtagatatcacagctcttcaagaagaactaacg
gacatcctatcatcggcggcggaatcggccaatgcgcgcgcttcgaaggtcatcagcatt
cgtgcggagcaacatactgcgctcgacctcccgagcttctgcgagctgttcaacgagtcg
tgggactttgtcgtaaagtcggaagtcatctgcaggcgaatgattgttggtctccgaggc
acgattgtcagccaggcgaagagtttcctgcagcacttccaccaagcccagctgaaccag
tctgccaaactcgtggaagacgagcagtggaacgccgcggaagtcgcgccctctgtccag
cgcgcagtcgacaccgtcgtcgacgcctccatctccgatcctccagaactcctctttaac
cgcccgccccaagacctcctctcgcccctcccgccaacatctccacagccgccctcgccc
tcgctcacagcgaacggcggcccgcgcccgtcctctcccctgccctccccgaacttcccg
ccttccccgggccgcagccagcgcaggcgctcagccaatgcacccacgaagcacctgcgc
gtcgaggagcgcgcatatttcgccgtgtccgcgacgctcgatgtgctcgtcctactcttg
gattatctgaaggtgatcgtgaacctgcccctgctgacgattgatacaatgagccgcatc
atcgagctcctcaagtcgttcaattcgcgaacgtgccaggtcgtgctcggggctggggct
atgcgctctgcggggctgaaaaacatcactgcgaagcatctggccctcgcgtcgcagtca
cttgcgatcatgatctcgctcatcccgtacatccgagagacgtttcgacgtcacctgagc
cagaagcaggcagtgatgctcatcgagttcgacaagctcaagcgagactatcaagagcac
cagaacgagatccacgcgaaactgattgcaattatgggcgaccggctgacggcacacatc
cgtacgcttcaggtgcgtttacctcccggttatcgctcgcctgctcacagctga
DBGET
integrated database retrieval system