Dichomitus squalens: DICSQDRAFT_52457
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Entry
DICSQDRAFT_52457 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K13095
splicing factor 1
Organism
dsq
Dichomitus squalens
Pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_52457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_52457
Spliceosome [BR:
dsq03041
]
Complex A
Other components
Complex A specific factors
DICSQDRAFT_52457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
zf-CCHC_3
SLU7_N
KH_1
zf-CCHC_4
zf-CCHC_6
DnaJ_CXXCXGXG
VPA1267
DUF8363
Motif
Other DBs
NCBI-GeneID:
18842395
NCBI-ProteinID:
XP_007362380
JGI:
52457
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MWRPATREVTGTNDTPLGNRRRFGLAPVEETAPPQLAQPSPSAYPRPQPQNDRESSRSDR
DTPPANGAATDPNAPRKRRSRWGDAKTEIPGLPTAINANGVSQAHLDNYAIHLRLEEINR
KLRLNDFIPPERERSPSPPPTYDAHGRRTNTREVRYRKKLEEERIKLVDRAMKNDPNFRP
PVEYHQMKRSQRPSEKVYIPVKEFPEINFFGLLVGPRGNSLKKMERDSGAKISIRGKGSV
KEGKARPEQYAEDAEEDLHCLVTADSEEKVATCVRLINKVIETAASTPEGQNDHKRNQLR
ELAALNGTLRDDENQICQNCGGVGHRKYDCPEQRNFTANIICRVCGSAGHMARDCTVNRD
PNAAHLGGGGGGSGPPPGMIKGGFDSEYASLMAELGETGKGSGGDGGRMPWSGGAGHDIT
AGGSSIPPWRRPEVWQSSAPANPQGGFGRPPQGQFGGYGGAPGGGYGGGAPAYGQPGYGP
PGGSSYYPQQPSQDYSAGYAQYYQNQYSQMQTSNP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaccagcaactcgcgaagttacgggcacgaatgacacgccgttgggcaatcgt
cggaggttcggtctagcacctgttgaagaaactgctcccccccagctagcgcagccttcg
ccgtcggcctatcctcgtcctcaaccccaaaatgatagagagagctcgcggtcagatcga
gacactcctcctgcaaatggtgctgctactgaccctaatgctccccgcaagcgacgcagt
cgttggggagatgcgaagaccgagattcctggtctgcccacggctatcaacgccaatggt
gtctcgcaggctcatctggataactacgccattcacctccgactggaggagataaaccgg
aagttacgtctcaacgacttcattccgcctgagcgcgagcgctctccttcacctcccccc
acgtatgatgctcatggtcgtcgtactaacactcgcgaggtccgctatcgcaagaagctc
gaagaggagcgtatcaaactcgtggaccgcgccatgaaaaatgacccgaacttccgccct
ccggtcgaataccatcagatgaagaggtcccagcgtccctctgagaaggtctacatcccc
gtcaaggagttcccagagatcaacttctttggactcctcgtcggtccccgtggtaacagc
ttgaagaaaatggagcgagacagtggagcgaaaattagcattcgtggcaagggcagtgtc
aaggaggggaaggccagaccagaacagtacgccgaagatgccgaggaagatcttcactgt
cttgttactgctgactctgaggagaaagtcgccacttgcgttagattgatcaacaaggtc
atcgagactgccgcttccactcccgaaggccagaacgatcataagcggaaccagctgcgg
gagctcgcggcgcttaacggtactctccgagatgacgagaaccagatatgccaaaactgc
ggtggtgttggtcaccgcaaatacgactgtccagagcagcgtaactttacagcgaacatc
atttgccgtgtctgcggtagcgccggacacatggcccgcgactgcacagtcaatagagac
ccgaacgcggcgcacctcggcggcggcggcggcggtagcggcccccctcccggcatgata
aagggcggtttcgactccgagtatgcgagtctaatggccgagctaggagagacagggaaa
gggtccggaggagatggtggacggatgccgtggtcgggaggagctgggcacgacatcact
gcaggcggttcgagcatccccccgtggcgccgccccgaggtctggcagagcagcgcacca
gcaaacccccaaggtggtttcggcaggcctccgcaaggtcaattcggtggctatggaggc
gcgccgggtggtgggtatggcgggggagcccctgcttacggccaaccgggttatgggccc
ccgggtggctctagctactaccctcagcagccatctcaggactacagcgctggctatgcc
cagtactaccagaaccagtattctcagatgcaaaccagcaatccctag
DBGET
integrated database retrieval system