Dichomitus squalens: DICSQDRAFT_53179
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Entry
DICSQDRAFT_53179 CDS
T03133
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12876
RNA-binding protein 8A
Organism
dsq
Dichomitus squalens
Pathway
dsq03013
Nucleocytoplasmic transport
dsq03015
mRNA surveillance pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_53179
09122 Translation
03013 Nucleocytoplasmic transport
DICSQDRAFT_53179
03015 mRNA surveillance pathway
DICSQDRAFT_53179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_53179
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_53179
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DICSQDRAFT_53179
Spliceosome [BR:
dsq03041
]
Complex C
Other components
EJC/TREX
DICSQDRAFT_53179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
BrxL_ATPase
Motif
Other DBs
NCBI-GeneID:
18842445
NCBI-ProteinID:
XP_007362886
JGI:
53179
LinkDB
All DBs
Position
Unknown
AA seq
164 aa
AA seq
DB search
MSDDGMNIDDGGVVRRKGRGFQSAAGNESAVTSEQVFDRVESGQTSETRAARSVEGWIVL
VTNVHEEATEEDVTDKFAEYGEIKNLHLNLDRRTGYVKGYALVEYETMAEAQAAIDGASG
TTLLEQPLQCDFAFVRPPPAGPKKGRGREGRGRSASPSRRRGGD
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgggatgaacattgatgacgggggggtcgtcaggaggaagggacggggt
tttcagagtgctgcaggaaacgagagtgctgtcacctccgagcaagtctttgacagggtg
gagtcgggacaaacctcagaaactcgggctgcacgatctgtcgaaggatggatcgttctt
gtcacaaacgtccacgaagaggccaccgaggaggacgtgacggacaagttcgcagagtac
ggggagattaaaaacttgcacctcaatcttgacagacggacgggttatgtcaagggctat
gcattggtggagtatgaaacaatggctgaagcgcaggcagccattgatggcgcatccggg
acgactctgttggagcagccgctgcaatgcgactttgcctttgtcaggccaccaccggca
gggccgaaaaagggccggggaagagaaggtcgtggacggagtgctagtccgtcgcgtcgg
cgcggaggggactag
DBGET
integrated database retrieval system
