Dichomitus squalens: DICSQDRAFT_54537
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Entry
DICSQDRAFT_54537 CDS
T03133
Name
(RefSeq) DNA binding protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
dsq
Dichomitus squalens
Pathway
dsq03430
Mismatch repair
dsq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DICSQDRAFT_54537
03460 Fanconi anemia pathway
DICSQDRAFT_54537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_54537
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
DICSQDRAFT_54537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18842541
NCBI-ProteinID:
XP_007363477
JGI:
54537
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MAETAPRSASPPPPGPRPIRRLQESVINRIAAGEIIHRPASALKELIENSLDAGATSIKI
TVKDGGMKLLQIQDNGSGIRKDDLPILAERFTTSKLSTFSDLKRLTTYGFRGEALASISY
VSNLTVVTKTKTDTCAWKAVYADGALVPVKPGTSKDPKPCAGNDGTTITVENLFYNTPTR
LSALRGSSEEYTRILDVVTKYAVHNPHVSFTCKKVGTPSPDVSTPSSSTTVQAIQLLYGQ
TLAKELLNVSVSSDKGKGKGKARATSPIQLSDDDNDEDAEAWNAEAHFTNANYQAKKMVL
LLFINHRLVESSRIKKALEAAYNGVLAKGASPFVYLSLHIDPRSVDVNVHPTKKEVHFLN
EDAIIERIADAMQEALIGQSHSRTFEYQTLLTGGIAEPPGTLKAKGKRKAQSEDADEDEG
AAEDSQDNPPEGEAAAAASHPTKRKVYSHHKVRTSLKDRTLDSMFPVAHPSQRPSKESEA
DGAASPGTPPVLRTQEIKESQCFLKSVRDLRAAVVKARHHQLSEILAKHTFVGVVDAPRC
LSLVQHNTRLYLLNHGALAAELFYQLGLRQFGNFSRIRLDPPPNLRTLVSLAVDAEEGVE
ESGFSKDEVVEQIVEIVMARRDMLQEYFNLAISEEGLVETLPMLLRDYTPNLDKLPLFLM
RLGPQVDWTAEQECFGTFLRELAFFYVPEPLLPECDADARDQAQDAQKAMLWQIQHVLFP
AMARYLVPPKSLLDRDVVQVADLPDLYRVFERC
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaccgctcctcgttctgcgtctccgccgccacccggccctcgccccatacgt
cgactccaggagtccgttatcaatcgcattgctgctggcgagatcatccaccgccctgcg
tctgcactcaaggagcttattgagaacagtctcgatgccggtgccacgtctatcaagatc
accgtcaaggacggcggcatgaaactgcttcaaattcaagacaacggctccggcatccgg
aaagacgacttgcctatcctggcagaacgctttacgacgtcaaagctctcaacgttctca
gacttgaagcggctgacgacgtacggcttccgaggagaggcgcttgcctccatctcctat
gtgtccaacctgaccgtcgtcacaaagacgaagactgacacatgtgcctggaaagctgtc
tacgcagacggtgccttagtccccgtgaagcccggtacgagcaaggatccgaagccttgc
gccggcaacgacggcacaaccatcaccgtagagaacctcttctacaacacgcctacgagg
ctctccgctcttcgcggctcctccgaggagtacacgcgcatcctcgatgtggtaaccaaa
tatgccgtgcacaatcctcatgtatccttcacatgcaaaaaagttggcacaccatcgccg
gacgtctctacgccttcatcgtccacgaccgtgcaagcgattcagctcctctatggtcaa
accctggctaaggaactgctcaatgtctctgtctcgtccgacaagggtaaagggaaggga
aaggctcgcgctacgtcacctattcagctcagcgacgacgacaacgacgaagatgccgaa
gcttggaacgcagaagcgcatttcactaacgcaaactaccaagcaaagaagatggtgctg
ttgctcttcatcaaccaccgattggtggaatcgtcaaggatcaagaaagcgctcgaagcg
gcgtacaacggggtgctcgccaaaggcgcatcgccctttgtctacctgagcttacacatc
gacccacgctctgtcgatgtcaacgtccatccaacaaagaaagaagtgcactttctcaac
gaggacgcgatcatcgagcgcatagcggacgctatgcaagaagcgctcattggccaaagc
cactcgaggacattcgagtaccagacgcttttgactggaggcatcgccgaacctcctggt
acactgaaggccaagggtaaacgcaaagcgcagtcggaagacgcggatgaggatgaaggc
gctgccgaagacagtcaagataatccgcctgaaggagaagccgcagcggcagcgtctcac
cccacgaagcgcaaagtgtactctcatcataaagtccggacttctctcaaagacagaaca
ttggactcaatgtttcccgtcgcacacccgtcccaacgaccgagcaaggaaagcgaggcg
gatggagcagcatctccaggaacacccccagttctcaggacacaagagataaaagagtct
caatgcttcctcaagtccgtcagggatctacgcgccgcagtggtcaaagccagacaccat
cagcttagcgagatcctcgcgaagcacacctttgtgggcgtcgtggacgcgccccggtgc
ctgtcgctcgtgcagcacaacacgcggttgtacctcctgaatcacggcgcgcttgccgcg
gagcttttctatcagctcgggcttcgccagttcggaaacttctcgcgcattcgcctcgat
cctccgccgaacctgcgcacgcttgtatcgctggccgtcgacgcggaggagggcgtggag
gagagcggattcagtaaggacgaggtcgtcgaacaaatcgtcgagatcgtgatggcgaga
cgggatatgctgcaagagtacttcaacctcgcgatctcggaggaggggctggtcgagacg
ctccccatgctcctccgggactacaccccgaacctcgataagctgccgctgttcctgatg
cgacttggtccacaggtggactggacagcagagcaggaatgctttggcaccttcctccgt
gagctcgcattcttctacgtgccagagccccttctccccgagtgcgacgcggacgcgaga
gaccaggcgcaggacgctcagaaggccatgctgtggcagatacagcatgtcctttttccc
gcgatggcgcggtaccttgtcccgcccaagtcgctgttagatcgcgatgtcgtgcaggtg
gctgacctgccagacctgtaccgcgtcttcgagaggtgctaa
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