Dichomitus squalens: DICSQDRAFT_55659
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Entry
DICSQDRAFT_55659 CDS
T03133
Name
(RefSeq) POP1-domain-containing protein
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DICSQDRAFT_55659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_55659
03016 Transfer RNA biogenesis [BR:
dsq03016
]
DICSQDRAFT_55659
03029 Mitochondrial biogenesis [BR:
dsq03029
]
DICSQDRAFT_55659
Enzymes [BR:
dsq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
DICSQDRAFT_55659
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
DICSQDRAFT_55659
Transfer RNA biogenesis [BR:
dsq03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
DICSQDRAFT_55659
Mitochondrial biogenesis [BR:
dsq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
DICSQDRAFT_55659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_N
POPLD
POP1_C
GCV_T
GCV_T_C
Motif
Other DBs
NCBI-GeneID:
18842626
NCBI-ProteinID:
XP_007363713
JGI:
55659
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MKGLPGAIDVEKFAESRAFEINAMHEAMHNARSNSTARAWQQLPRHLRRRAASHDVRRVP
LRLRDKARAEMDPARRKALGRNNPKQGKLKKVRRTVALLRRQKDKTWLETHIWHAKRMHM
DNMWGYRLAITPTEKSFRPSHRASVHGSILHDASYFATIELKGPEDIIREALANCCDCQG
PSAGAKRFLTGARATETYIYEYNKYPYGLIGPATIMWHADAPGPNGPQAPAIIRGTNAKG
KGDGKEKEVPWVDPERRIRIVWIRVHPSMTEEVHEALRVSTAFALDAAKQTGRTAEVEIA
DLREHFNVFEIMGPKASQVIKGALKPVDDKRDEFKRFWTSLNRIQSAGAVPRGMVIGFTV
HDPRLSFPPKNVKLNIESGPSLSPASTVFPSACLAQSQIWDEDVRMVLRKPRYKKKDLDQ
RRSNNLVPGTPLKSERNDDRVPVLLIQRSVENAALSQIQNFPRLSSTTSLHGWTLIVPQG
WGMPFLSSLIYTGTRVGGQRERQTQAFEAGCTYFPRDFPTTEAYDVYAEDKEDEEREAWE
RKPPAKRPNYEKLGTRSPWRPDWGVVLGIEEPAKSHPEAEELLDTQRDPMVADEAAATEG
NRKVDIWLLRGPDIPQLVAEVSSMLNPAAGLLSQVNQARAKRKLDPLPVNLHADDLIKGA
LVQVSITLCGRGFPDDLAIIYRVGDDEAKEWMRAEVNKKNGLSLLQDGPDETELSQVPPP
SEGIIGYVTTGNFSLSLGEGHAVGAIPLSQYLDLRKQAQRLRNDTKLLVKLRNRHETRCR
AALVELLH
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggctcccaggtgcgatagacgtggagaaatttgcagagtcccgggcattcgaa
atcaacgccatgcacgaagccatgcataacgctaggtcaaattctactgcgcgcgcttgg
cagcagctccctagacatctgcgtcgccgagccgcaagccatgatgtccgacgagttccc
ctgaggttgcgagacaaggctcgtgccgaaatggatcctgcccgtcgcaaagcactaggc
cgcaataatcccaaacaaggaaaactcaagaaggtgcggcgcactgtagccctcctccgt
cgacaaaaggataagacgtggttggagacgcatatatggcatgcgaagaggatgcacatg
gacaacatgtgggggtacagactggccatcacgcctacggagaagtcattcaggccgtca
catagggcatctgtgcatgggtctatcctacacgatgcttcttacttcgctaccattgag
ctcaagggtcctgaggacatcatccgtgaggctcttgccaactgctgcgactgtcaagga
cccagcgccggtgcaaagaggtttctaacaggtgcccgtgcgactgagacctatatctac
gaatacaacaagtatccatatggcctcattggtcctgctacaatcatgtggcacgccgac
gctccagggccgaatgggccgcaggcccctgccattatcagaggcacgaacgccaaagga
aaaggcgatggaaaggagaaggaagtgccatgggtagacccagagcggcgtatccggatc
gtctggatccgtgtccatccttcgatgacggaagaggtacacgaggcgctccgtgtctcg
acggcctttgcactcgacgcggcgaagcagacgggacgcactgctgaggtggaaattgcg
gacctcagagagcacttcaatgtgttcgagatcatgggcccaaaggcaagccaggtcatc
aagggtgccttaaaacctgtagacgacaagcgagacgagttcaagcggttctggacctct
ttgaaccgcatacagtccgcaggcgcagtgccgcgagggatggtgattggtttcacggtc
cacgacccgaggctcagtttcccgcctaagaacgtgaaactgaatatcgagagtggacca
tcgctttcgccagcgtccaccgtttttccttctgcttgtctggctcaaagccagatttgg
gacgaagatgtccggatggtcctgcgcaaaccgaggtacaagaagaaagacttagaccag
cgtcgatcaaacaaccttgtccccggaacgccgctgaagtccgaacgcaacgacgaccgc
gtccccgttctcctcattcaacgctcggtggagaatgccgccctctcccagattcaaaac
tttccccgcctctcgtcgacgacgtccctgcacggctggacgctgatcgtcccccagggc
tggggcatgcccttcctgtcctctctcatctataccggcacccgcgtcggcggacaacgt
gaacgccagacacaggcgttcgaagcgggttgcacatatttcccgcgcgacttcccgacg
acagaggcgtacgacgtgtacgccgaggacaaggaggacgaggaacgcgaggcatgggag
cggaagcccccagcgaaacggccgaattacgagaagctggggacgaggagcccgtggagg
ccagattggggcgtcgtgcttggtatcgaagagccagcgaagtcgcacccggaagcggag
gagctcctagacacgcaaagggacccgatggtcgctgatgaggcggcggcaacggaagga
aataggaaggttgatatatggctgctgaggggcccggacatcccacagcttgtagcggag
gtctcgtcgatgctgaacccggccgccggactactcagtcaggtcaaccaggcgcgcgcg
aaacgcaagcttgacccgcttccggtgaacttgcatgcagacgacttgatcaagggcgcg
ctcgttcaggtcagcattacgttgtgcgggcgagggtttcccgacgatttggctatcatc
taccgcgtcggagatgacgaggcgaaggagtggatgagggccgaagtgaataagaaaaat
gggctctcgttgctccaagatgggcccgacgagactgagctatcacaggttcctcctccg
tctgagggtatcattggatatgtcacgacgggtaacttttcgctctcgcttggtgaagga
catgcggttggcgctatacccctttcgcagtatctggacctgcgcaagcaagcccagagg
ctgcgcaacgatacgaagctgctcgtcaagttgcgtaatcgtcatgagacacgttgccgg
gcggcgctagtggagctcttgcattga
DBGET
integrated database retrieval system