Dichomitus squalens: DICSQDRAFT_58947
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Entry
DICSQDRAFT_58947 CDS
T03133
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DICSQDRAFT_58947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_58947
Enzymes [BR:
dsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DICSQDRAFT_58947
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
DICSQDRAFT_58947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
18842848
NCBI-ProteinID:
XP_007364943
JGI:
58947
UniProt:
R7T1L0
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MPDGSARTPKRPNSSFNTLEREKNFKSPPKDAAVVPILNEFVTPHIESFNALFNDSGLPA
GDGDGRGLLSLGLEDIGRRVVFDGKGDIGAESGQRGWGNRLTMWYEQVTVARPMVPEKDK
DAVERRVFPTEARERLTSYRGRMTAKICWQVNDGPVEVQMRDCGLLPIMVRSARCNVRGM
SSADLVKHHEEPEEFGGYFIINGNERLIRYLILPRRHHVISLVRPSFVNRGPSYTPYAVQ
IRCVRPDQTGVTNTLHYLSNGSAMLRFSWRKQEYVIPIMLILKALVSASDKEIFEGVMMQ
DYEDTFLSDRVELLLRSFKMYSLYTGDQCLQYLGDKFRVVVNMPEDWTNQAIGVWLINKV
VLVHLQNPRDKFRMLLFMLRKLFALVSKSCSVDNPDSPQHQEVLLPGTLYGMIIKERLEE
ALNSFREGIALDVRNSNPAVDFFDKRYIKKVLSRTSYDIGAKMSNFLATGNLVSPTGLDL
QQASGFTIVAEKLNWMRYISHFRSIHRGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSP
CGLLNHLSRTCRIVTSPLAVAHLPALLAAHGMTQAFAPSVDGRRNLCVQLDGRLIGWAPS
AVCKQLATSLRIWKTEGKHSVPLDLEIGFVPVSKGGQYPGLYLFSSRSRMMRPVKYLANG
RDDQVGSFEQVYMDIACTPAEIEDGVSTHVEHAPTNFLSILANLTPFSDFNQSPRNIYQC
QMGKQTMGTPATALQHRTDNKLYRLQTGQTPVVRPALHNTYGMDSFPNGTNAIVAVISYT
GYDMEDAMILNKSAHERGFGYGTVYKAYTVDLQELTGSRRQTGPPTLHFGVGPEIRMEEG
PNQHAAAKLVDADGLPIVGSRLNPGDPIAAYVDDTTGRTKFVKYKGDEVAYVDTVRLLGS
DAGDQELQKINITLRITRAPVIGDKFSSRHGQKGVCSQKWPAIDMPFTESGMQPDVIINP
HAFPSRMTIGMLVESMAGKAGAMHGLAQDATPFQFTEEDTAIDYFGEQLVAAGYNYYGNE
PMYSGITGQEFAADIYIGVVYYQRLRHMVLDKFQVRTIGPVDPVTRQPVKGRKRAGGIRF
GEMERDALIAHGTAFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDVTLGEMVIGASGML
KPTGPGGEYCRVCRAAAEEEETRARQALATGQASATANGHADVRVQIPSQHILGPASKGG
DMDIIAVPYVFRYLCAELASMGIKVSLEVR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgccagatggctctgctcgcacgcccaagcggcctaatagctcattcaacacactagag
cgcgagaagaacttcaagagcccacctaaggatgctgcggtcgtcccgatcttgaatgaa
ttcgtgaccccgcacatagagtccttcaatgcgttattcaatgactccggacttcctgca
ggtgacggagacgggaggggacttctatcattggggctggaggacattggaaggcgggta
gtgtttgatgggaagggagatatcggagcagaaagtgggcagagaggatgggggaaccgg
ttgaccatgtggtatgaacaggttactgttgcgcgacctatggttcctgagaaagacaaa
gatgctgttgagaggagagtattcccaacggaagctcgcgaacggttgacatcatatcgc
gggcgtatgactgccaaaatatgctggcaagtgaacgacggtcccgttgaagtccagatg
agggattgcggtcttctgcctattatggtcaggtcagcacggtgtaacgttcgcggtatg
tcttccgcggaccttgtaaagcatcacgaggagcccgaagagttcggcgggtacttcatc
atcaatgggaatgaacgtctcatccgttacctcatcctccctcgtcgacaccacgtcatc
tccctcgtccgaccctcgttcgtcaaccgcggtccatcctacaccccttacgccgtccag
atacgctgcgtccgccctgaccagacgggcgtcacgaacacactccactacctctcgaac
ggtagcgcgatgctcaggttctcctggcgcaaacaagaatatgtcattcccatcatgcta
atcctcaaagctctcgtttccgcgtccgataaggagattttcgagggcgttatgatgcaa
gactacgaggacacattcctatcagatcgtgtcgagctgttactcaggagtttcaagatg
tacagcttgtacacgggagatcaatgtctgcagtacttgggtgacaagttccgcgtggta
gtcaacatgcccgaagactggactaaccaggccattggcgtatggctcatcaataaagtc
gtactcgtccatctgcaaaacccaagagacaagttccgcatgctccttttcatgctgagg
aagctctttgcactcgtctccaagtcatgtagcgtcgacaaccccgattctcctcaacac
caggaagtcctcctacctggtacactctacggcatgatcatcaaagagcgtctcgaggaa
gccctcaacagcttccgcgagggcattgcacttgacgttcgcaactcaaatcctgctgtg
gacttcttcgacaagcggtatatcaagaaggtgctcagcaggacgagctacgatatcggc
gccaagatgtccaacttcctcgccaccggcaacctcgtatctccgacgggccttgacctc
cagcaagcgtccggtttcacgatcgtcgccgagaagctcaactggatgcgttatataagc
cacttccgctccatccaccgtggtgccttctttgccgagctcaagaccacgaccgtccga
aagctccttcccgaagcgtggggcttcctctgccctgtgcacacgccggacggctcgccc
tgcggtctgctcaaccatctctcccgcacatgccgcatcgtcacctctcccttagccgtc
gcacaccttcccgcactgctggcagcacacggcatgacgcaggcgttcgcgccttcggtt
gatggccggcgcaacctctgcgtgcagctcgatggacgactcatcggctgggccccatcc
gcggtatgcaagcagctcgcgacgagcctgcgaatatggaagaccgaaggcaagcacagc
gtcccgctcgacctcgaaatcggcttcgtgcctgtatctaagggcgggcagtaccctggc
ttgtatctgttctcgagccggtctaggatgatgcggcctgtgaagtatttggcgaacggg
agggacgaccaggtgggatcgttcgagcaagtgtatatggacatcgcgtgcacgcctgcg
gagattgaggacggggtgtcgacacatgtggaacacgcgcccacgaacttcttgtctatt
ctcgcgaacttgacaccgttctcggacttcaaccagagtcctcgtaacatctatcaatgt
cagatgggtaaacaaacaatgggaacgcctgcgacggccctccagcatcgcaccgacaac
aagctctaccggctccaaaccggccaaacgcccgtcgtgcgccccgcactgcacaacacg
tacggtatggactcgttcccgaacggcacgaacgcgattgttgccgtcatctcctacacc
ggctacgacatggaggacgcgatgatcctcaacaagtccgcacacgagcgcgggttcggt
tacgggacagtttacaaggcatacaccgtcgacctgcaggagctcacgggctctaggagg
cagaccggccccccaacgctacattttggagtgggcccggagatcagaatggaagagggc
cccaatcagcatgcggcggcgaagctggttgacgcagatggtttgcctattgttgggtca
aggctgaaccctggggacccgattgcggcgtatgtggacgacacgactggacgcacgaag
ttcgtcaagtacaagggcgacgaggtcgcgtatgtcgacacggtccgcctgctaggcagc
gacgccggtgaccaagagctgcagaagatcaatatcaccctgcgcatcacccgcgcgccg
gttatcggcgacaagttctcatcgcggcacgggcaaaagggtgtctgctcgcaaaaatgg
cccgccatcgacatgccgttcactgagagtggcatgcagcccgacgtcattatcaacccg
cacgctttcccgtcccgcatgacgattggtatgttagtcgagagcatggctgggaaagct
ggtgcaatgcacggtcttgcgcaggacgcgacgcccttccagttcacggaagaagacact
gcgatcgactacttcggcgaacagctcgtcgcggcgggctacaactactacgggaatgag
ccgatgtactccggcatcaccggtcaggagttcgcggcggacatctacatcggtgttgtc
tactaccagcgccttcgacacatggtcctcgacaagttccaggtgcgaacaataggcccc
gtcgatcccgttacccgtcagcccgtcaagggccggaaacgcgcgggtggtattcgtttc
ggagagatggagcgggacgcgctcatcgctcatgggaccgcattccttttgcaagaccga
ctcatgaactgctccgactattcgacggcatgggtgtgcaggacttgcggcagcttgatc
tcgctcgggtacgacgatgtcaccctcggcgagatggtaatcggcgcgtcgggcatgctc
aagcccacaggacctggcggtgagtactgtagagtatgccgtgctgctgcggaagaagag
gagacacgcgcaaggcaagccttggcaaccgggcaggcatcagctactgccaacgggcac
gccgatgtgcgcgtgcagataccatcgcagcacattcttggaccggcctcgaagggaggc
gacatggacatcattgccgtaccttacgtcttcagatacctgtgtgccgaactcgcatcc
atgggtatcaaggtgtcattagaggtccggtag
DBGET
integrated database retrieval system
