Dichomitus squalens: DICSQDRAFT_61149
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Entry
DICSQDRAFT_61149 CDS
T03133
Name
(RefSeq) Rexo1 protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dsq
Dichomitus squalens
Pathway
dsq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DICSQDRAFT_61149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_61149
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
Pre-60S particles
RNases
DICSQDRAFT_61149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
CHORD
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
18843022
NCBI-ProteinID:
XP_007366038
JGI:
61149
UniProt:
R7SYI3
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MFSTLGLFQTLPCPEKEHCARPNCLFSHRPDLIQFPVTPVPVDVPRVSSSTTHGSRLSAP
EPTAGSSTSIPAKRSISSPLRAAGVSNVIPSSEPPTKFQRTGTPRRPVAVPTGVQSSSTG
VPVLKVPPAQSQVALPVRQAMLKSLYDHFVVLYEKILPANPTLASEHALKQEQEVYAKSN
KLTYRNAVISSIAALKKRSKPDTSSHASVGTEAEVQAREEMRKRMESLRLTVSQLAPYVM
TLDDLKTWGYMVDIPPGPGGDQPHEEGSIKTCERCQEKFVVKRREQADQCRFHWGKAFSS
RMNGEKRRVYTCCSKTADEDGCEVGPHVFYESDPETLHRRHAFIHSRAPLDSGDTALDIV
ALDCEMIYTTGGMRVARVSVVDGSGKEVLDELVRMDEGVEVIDFNTRFSGITAENYATAS
LPLQSIRKSLDKIINSQTIIIGHALDNDLKTLRMIHHRCVDTVVLFPHTAGPPYRRALRA
LAKEFLGQTIQAAGAAGHSSVEDSIATLDLVRWHVLNGPRPRPKVDPRPAQMASDPSAS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttctccactctcggcttattccaaacactcccgtgtcccgagaaagaacactgcgca
cgacccaactgcctcttcagccatcgtcctgacctcattcagttcccggtcactccggtt
ccagtcgatgtgccaagagtgtcctcatctactactcatggatctaggctttccgcacct
gagcccactgctggatcctctacatctatccctgcgaagcgttccattagctccccattg
cgtgcagctggggtcagcaatgtaattccatccagcgaacctccgacaaagttccagcgt
acaggaactccaaggcggcctgtagcggtgcctacgggagtacagtcgtcttcgacaggt
gtgcctgtgctcaaagtgcctcccgcgcaatcgcaagttgcactacctgtccgccaggcc
atgttgaagtcgctgtacgatcacttcgttgtgctttacgaaaagatcctccccgccaac
cctacccttgcctccgagcacgcgctcaagcaagaacaagaagtttatgcgaagtccaac
aagctaacatatcgtaatgcagtgatatcatccatagcagctcttaagaagcggtccaaa
cccgatacatcttctcatgcgtctgtgggcaccgaagccgaggtgcaggctcgagaagag
atgcgcaaaaggatggagtcactgcgtctgacagtctctcagctcgctccatatgtcatg
actctggacgatcttaagacgtggggctatatggtcgacatcccacctgggccaggaggc
gaccaaccacacgaagagggctccattaaaacctgcgaacgatgtcaagagaagttcgtg
gtcaagagacgcgaacaagcagaccagtgtaggttccactggggaaaggccttctcctct
aggatgaatggggagaaacggcgtgtatacacgtgctgctcaaagacggcagacgaggat
ggttgtgaagttggcccccatgtcttctatgagtccgatccggaaaccctgcacaggcga
catgctttcattcacagccgtgcccctcttgattctggcgacactgctctggacatagtg
gctctagactgcgagatgatctacacgacgggggggatgcgggtggcccgggtttccgtg
gtggacggaagtggaaaagaagtcctcgacgagcttgtccgcatggatgagggtgtggaa
gtcatagacttcaacacccgcttctccgggataactgcggaaaattatgctaccgcatcg
ctaccccttcaatctatccgcaagtctcttgacaagatcatcaactcgcagaccatcatc
attggacacgcgttggacaatgacttgaagacgttgcgcatgatccaccatcgctgcgtc
gataccgtagtgctcttcccgcatacagcaggtcctccgtaccgaagagccctgagggca
ctagccaaggagttccttggtcagaccatacaagccgccggcgcggccggacacagctct
gttgaagactcaattgcgacccttgacctcgtcagatggcacgtcttgaacggacccaga
ccaaggccgaaggtggatcctcgcccggctcaaatggcttcggacccttctgcatcatag
DBGET
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