Dichomitus squalens: DICSQDRAFT_62125
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Entry
DICSQDRAFT_62125 CDS
T03133
Name
(RefSeq) IkappaB kinase complex IKAP component
KO
K11373
elongator complex protein 1
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsq03016
]
DICSQDRAFT_62125
Transfer RNA biogenesis [BR:
dsq03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
DICSQDRAFT_62125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
TPR_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
WD40_CDC20-Fz
SEP
Motif
Other DBs
NCBI-GeneID:
18843095
NCBI-ProteinID:
XP_007366559
JGI:
62125
UniProt:
R7T0N1
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MRNLALSTLDRVSLTERDLSGEPSGVTCLAVDLDQNALFVTTESHDTTNDADVHVSICKI
THEEEQERISLVTSFRTPTTLATNPWSADSARKDSHIREHPPEVLSLHVATDSHSLVVIT
RAGDITTISLDENQSTAEVVGSVDGGVMGAAWSPDDTLLVLVTGEDKLLVMTSTFDVLSE
GPLHPTEFGEDAPINVGWGAKHTQFHGSLGKAAATSSIPPTAIGASPDDDGHVRISWRGD
GAYFSVSVLEGANETRPHRKIRVYSREAALQSTAEPVPGLEHGLSWRPSGNLIVGTQRFG
NIPGQTSAAQNLDVGSGLGPGREGRHDVVFFERNGLRHGEFTLREWTPEGQTTSERLKWG
YRVREVGWSSDSNVLSVWIEQEDGDVVQLWTTGNYHWYLKQEITAPGQDGTPGRFTTVQW
HPEDALRLILTTSSEIIQRTYAWDIISSPSKPPVDSGTVAVVDGASLLLTPFRTQNVPPP
MSAHSLSLRLPTSSLPGILKRSPTPIHAAFASSRDLLAVLWEPGVLEVYDLKTRLGAGRG
KVMDPVSVWAGPVREDGSSNSHRQVVFDHSADSKTAVRLAVLGSGSASDVVTILELQSSE
SRTAEVLLPTHNGRLVAGQGIFWEAPDGQLHEVDAENNDPVEVAQFPEFCFWTAHALVTD
DTSEGGTTTTPLYIGLSHAGKLHVTDGQATRALASNVNSFTTTSGFLIYTTTAHLAHFAP
LRELMSALKTADVPLPESETRRVERGSRIVTAVPSTMSLVLQMPRGNLETINPRPLVMEI
VRQDIDSGNYAKAFTACRKHRVDLNVFVEHNREVFIKGIPSFVEQVSDVDYVNLFLTSLS
QGNLPPELISRICDEIRVELERRDLKEYVNSILTAHVVKRPPDHEAGLALLLRLKESEPN
LVEDAVKYIIFLVDADRLFDTALGMYDFSLVLMVAQHAQKDPREYLPFLRELRALDHYYQ
RFRIDDHLKRYEKALTNLSLAGPARFEEAMAYVEKHRLYDHALLTWRGTERYESVLDIYG
DWLFERRDFREAAFVFRQANKPQKAMISHEKALDWQELFELAVQQELSLEDLKNTAYRVA
DDLISKKRTSEAALVLLDYAKDVREATIALIEGSHFSEARRVIVLHRRPELLEEIIHPGS
LECRSRIAEELGEMRDQLRKQLNRVRELRVRKIEEPDAFYGVEDTDLHNVDVMTDISMAP
TTFTRYTVAPSAVSKASSKRSSRSKRKLERKVGSGRKGTVDEEEYLLKSVSKLVTRFNTT
QADSTSLLPHLLQFTEEHRTEAASLQKELEEFAVELTEAVDEIWKKAAENQEGGEGANPS
ADSWAARMEAHEKRKHTNPGDTVPKPDLAKQEWKLKLLDVR
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacttggccctatcgactctagaccgggtctccctcacagagcgagatttatca
ggagagccgtccggcgtcacctgcctcgccgtagatctcgaccaaaacgccctgttcgtg
actacagagagccatgacaccacaaatgatgcagatgtacatgtgagcatctgtaaaatt
acccatgaggaggagcaggagcggatctctctagtcactagtttcagaacacctaccact
cttgccacgaacccatggtctgcagactcagcgaggaaggattctcatatccgcgaacac
cctcccgaggtgctctcgctccatgtcgcaacggactcccattcacttgtcgtgatcact
cgagcaggcgatatcacgacaatttccttagacgaaaatcagtctacggccgaggttgtc
ggctccgttgatggtggcgtcatgggtgcagcatggagcccagacgatactctccttgtc
ctcgtaacaggcgaagataaattactggtcatgacgtctacgttcgatgtactatctgaa
gggccgctgcatcctacagagttcggcgaagatgccccgataaacgtcggatggggcgca
aagcacacccagttccacggctctttgggaaaagccgccgcaacatcctccattcctcca
acagcgatcggcgcaagtcctgacgacgacggtcacgtacgcatcagctggcgaggtgac
ggtgcgtacttctctgtcagcgtgctcgagggcgcgaacgagacacggccgcatcgcaaa
atccgagtatactcccgtgaagcggcattacagagcacagcggagcccgtgccgggacta
gagcatgggctgtcttggcgcccatcaggcaacctcatcgtgggcacacagcgatttggt
aacattccgggacaaacgagcgcagctcaaaatctcgatgtgggatctggattgggacct
ggacgcgagggcagacatgatgtcgtgttcttcgaacgcaatggtctgcgccacggggag
tttaccctgcgggagtggacgcctgagggccagaccaccagcgagcgattgaagtgggga
tatcgtgttcgcgaggtcggatggagctctgactcgaatgttctgagtgtatggattgag
caggaagacggcgatgtcgtgcaattgtggaccaccgggaactatcactggtatctgaaa
caggagataaccgcccccggtcaagacggtacacctggccgcttcaccaccgttcaatgg
catccagaggacgctctccgacttatcctcaccacatcgagcgaaataattcagcggacg
tacgcttgggacatcatcagttctccgagcaagcctccagtcgactcgggcaccgttgca
gtagtggacggtgcaagccttcttctaacaccgttccgcacgcagaacgtgcctcctccc
atgtctgcccactcgctctctctgaggctacctacctcatctctccctggcatattgaag
cgatctccgaccccgatccacgcggccttcgcgtcttcgagagatctactcgcagtgctc
tgggaaccaggtgttttagaagtatatgatctcaagacccgtctaggtgctggccgcggt
aaggtcatggatcccgtctctgtatgggctggcccggtccgagaagatggatcatcgaat
agtcaccgccaggtcgtgttcgatcacagcgcggactcgaagaccgcggtccgcctggct
gttctcggatccggctctgccagcgacgttgtgaccatccttgaactccagagcagcgaa
tcgaggacagcagaggtccttcttcctactcataacggaagactggtcgctggccagggt
atcttctgggaagcacctgacggacagctacacgaagtcgacgctgagaacaatgatccc
gtcgaggttgctcagttccccgaattttgcttttggactgcgcatgcattggtcacggat
gacacgagcgaggggggaacgacgaccacccccctgtacatcgggctgtcgcatgctggc
aaactgcacgttaccgatggtcaagctacccgcgcactcgcttcgaacgtcaactccttc
acgaccacgtctgggtttctcatttacaccaccaccgcccacctcgctcactttgcgcct
ctgagggaattgatgtctgccttgaagactgcggatgttccccttccggagtccgagacg
aggagagtggagcgaggctcaaggatcgttactgctgtcccgagcacgatgagccttgtg
ttgcaaatgccgagagggaacttggagaccataaacccgagaccgctggtcatggagatt
gttcgccaggacattgacagcgggaattacgcaaaggcgttcaccgcgtgtcggaagcat
cgcgtcgacctgaatgtctttgtagagcacaatcgcgaggtcttcatcaaaggcatccca
tcctttgtcgaacaggtctctgatgttgactacgtcaacctcttccttacaagtctaagt
cagggcaacctcccaccggagcttatttcccggatatgtgacgagatccgggtagagttg
gagcgcagggacctcaaggaatatgtcaactccatattgacggcccatgtcgtcaagaga
ccgccagaccatgaggcgggcctggcattattacttcggttgaaggagtctgaaccaaat
ctcgtcgaggacgctgtcaaatatatcatcttcctggtcgatgcagacaggctgtttgac
actgctcttggaatgtacgacttctcactagtcctcatggtagcacagcatgcacagaag
gacccaagagagtacctgcctttcctaagggagctgcgtgctttggatcactactaccaa
cgcttcaggatcgatgaccatctgaagcggtatgaaaaggccttgacgaacctcagtctc
gccggtcctgcgcgattcgaagaggctatggcctatgttgagaagcaccgtctgtatgac
catgctctcctaacctggcgaggcacagaaagatacgagtcggtcttggacatctacggc
gactggcttttcgagcgtcgagatttccgtgaggctgcatttgttttccgacaggcgaac
aagccccagaaagcgatgatctcgcatgagaaggcgctcgattggcaagagttgttcgag
cttgctgtgcagcaagaattgtctctcgaagacctcaagaacactgcctatcgtgtagcg
gatgaccttatttccaagaagaggacatcggaagcggcactcgtcttattggattacgcg
aaggatgtacgtgaggccacgattgcactcatcgagggcagccatttctcggaagctcgt
cgcgttattgtcctgcatcgccgaccggagctccttgaagagatcatccatccaggatcg
ttggagtgtcgctcccgcatcgccgaagaattaggggagatgagagatcagcttcgcaag
caactcaacagagtgcgagagctccgagtacgcaaaatcgaagaaccggatgcgttttat
ggagtcgaggacacagatctgcacaacgtggatgtcatgacagatatctcgatggcaccc
acgactttcacgcgatacacggtggctccgtcagcagtttcaaaggcgtcttcgaagcga
agttcacgctcaaagagaaagctcgagcggaaggtcggctcaggaaggaaaggcacagtc
gacgaggaggagtacctcctcaaatcagtttctaagctcgtcacccgcttcaacaccaca
caagccgacagcactagccttctcccgcacctacttcaattcacagaggaacatcgcact
gaggccgcttcactccaaaaggagttagaagagtttgctgtggaactgaccgaagccgtg
gacgagatttggaagaaagcagccgagaaccaggaaggcggtgagggcgccaacccgtct
gcagatagctgggccgcacgcatggaagcacatgagaagcgcaagcacaccaatcctggg
gacaccgtacccaaacccgatttagcgaagcaggaatggaagctgaagctactggacgtg
cgctag
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