Dichomitus squalens: DICSQDRAFT_63825
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Entry
DICSQDRAFT_63825 CDS
T03133
Name
(RefSeq) DNA replication factor C, large subunit
KO
K10754
replication factor C subunit 1
Organism
dsq
Dichomitus squalens
Pathway
dsq03030
DNA replication
dsq03410
Base excision repair
dsq03420
Nucleotide excision repair
dsq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DICSQDRAFT_63825
03410 Base excision repair
DICSQDRAFT_63825
03420 Nucleotide excision repair
DICSQDRAFT_63825
03430 Mismatch repair
DICSQDRAFT_63825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsq03032
]
DICSQDRAFT_63825
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_63825
DNA replication proteins [BR:
dsq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DICSQDRAFT_63825
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DICSQDRAFT_63825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_30
nSTAND3
AAA_22
AAA_5
RuvB_N
AAA_18
NTPase_1
AAA_14
AAA_16
AAA_19
AAA_24
AAA_assoc_2
AAA_33
RNA_helicase
AAA_28
Filo_VP24
Motif
Other DBs
NCBI-GeneID:
18843251
NCBI-ProteinID:
XP_007367249
JGI:
63825
UniProt:
R7SVD8
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MKTARAGPSAPGSKQIPMAQDPNCLAGLSFVFTGELSSLSRDEAVELAKRYGGRVTGQPS
SKTSYVVLGADAGPSKLKAIAKNNLKTLDEDGFLALIATRKEEEAIRQSAREMEAREKAA
SKAAAATAPGGAGGAGAAARTASENLLWTARYAPQSLKEICGNKGQVEKLQTWLGSWAAN
VRSEFKKPGKDGMNVFRAVMITGPPGIGKTTSAHLCAKLAGFTPVELNASDARSKKLVEN
STNIMNTSLDGWMSGGQKTNAAGVTITDKSCLIMDEVDGMSAGDRGGVGALVALIKRTKI
PIICIANDRGAQKLKPLVSATYNLTFRRPEVNMVRSRIMSILFKEGMKIPANVVDQLVQG
AQADIRQVLNMLSTWRLANNTMDFDEGKNLVKMNEKYTVMTPFGVINKILGPGMFLPTTR
ETLGDKMEMYFHDPSFVPLFMQENYLKTQPSRIRNLDGPEKTLKHLELMDKAATSISDGD
IVDSLIHGPNQYWSLMPLHAVCSTVRPASFLYGMGAGYGGPNAMSFPQWLGQNSKQSKLS
RQLTDVQARMRLKVSGDKSEIRQSYIPSLFPHIVQPLMEQGASAVDETIEFMDEYFLTRE
DWDTIVELGVGDHNDAGVLKKISTATKTSFTRKYNSRDHPVAFHKAEALGKAPKKLAAAG
PAPDLEEAFDVDDEVPEAEEDEKQETDDDPERDSLIKAPKKGKAAAGKGKAPAKAKKS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgcgcgcgcaggcccctccgccccgggctcgaagcagatcccgatggcgcag
gacccgaactgcctcgcgggcctctcgttcgtcttcacgggcgagctgagcagcctctcg
cgcgacgaggcggtcgagctcgcgaagcgctacggcgggcgggtaacaggccagccgtcg
tccaagacgtcgtacgtcgtcctcggggcggacgcggggccgtcgaagctgaaggcgatc
gcgaagaataacctcaagacgctcgacgaggacggcttcttggcgctcatcgccacccgc
aaggaggaggaggcgatccggcagagcgcgcgggagatggaggcgcgcgagaaggccgcc
tcgaaagccgccgcggccaccgccccaggaggagcaggaggagcgggtgctgcggcacgg
acggcgagcgagaacctgctgtggacggcgcggtacgcgccgcagagcctgaaggagatc
tgcgggaacaagggccaggtggagaagctgcagacgtggctgggcagctgggcggcgaac
gtgcggagcgagttcaagaagccgggcaaggacgggatgaacgtgttcagggcggtgatg
atcacgggcccgccggggatcgggaagacgacgagcgcgcatctgtgcgcgaagctggcg
gggttcacgccggtcgagctgaacgcgagcgatgcgcggagtaagaagctggtcgagaat
agtacgaacatcatgaacacgtccctcgacgggtggatgtcgggcggacagaaaacgaac
gccgctggtgtgacgatcaccgacaagtcctgcctgatcatggacgaggtcgacggcatg
tccgccggggaccgcggcggcgtcggcgcgctcgttgcgctcatcaagaggaccaagatc
ccgatcatatgcatcgcgaacgaccgcggcgcgcagaagctcaagccgctcgtctcggcg
acgtacaacctcacgttcaggaggccggaggtgaacatggttcggtcgaggattatgagc
atcttgttcaaggaggggatgaagatccctgcgaacgtcgtggaccagctcgtccagggc
gcgcaggcggacatccggcaggtgctgaacatgctctcgacgtggcgactggcgaacaat
actatggactttgatgagggcaagaaccttgtgaagatgaacgagaagtacacggtcatg
acccccttcggggtcatcaacaagatcctcggccctgggatgttcttgccgacgacgcgc
gagacactgggagacaagatggaaatgtacttccacgacccgtcgttcgtcccgctcttc
atgcaggagaactacctgaagacccaaccctcgcgcatccggaacctcgacgggcccgag
aagacgctcaagcatctcgagctcatggacaaggccgcaacgtcgatctcagatggggac
atcgtcgacagcctcatccacggtccgaaccagtactggtcgctcatgccccttcacgcc
gtctgctcgaccgtccgccccgcgtcgttcttgtatggcatgggcgcgggctatggcggg
ccgaacgccatgtcgttccctcagtggctcgggcagaactcgaagcagtcgaagctcagc
agacagctaacggatgtgcaggcccggatgcggctcaaggtgtcgggcgacaagtcggag
atcaggcagtcgtacatcccgtccctgttcccgcatatcgtccagccgctcatggagcaa
ggagcgagcgcggtggacgagacgatcgagttcatggacgagtacttcctcacacgcgag
gactgggatacgatcgtcgagctcggcgtcggggaccacaacgatgccggcgtgctcaag
aagatctcgacggctacgaagacgtcgttcaccaggaagtataattctcgggaccaccct
gtagctttccacaaggcagaggccctcgggaaggctccgaagaagctcgccgcggcggga
cctgcaccagaccttgaggaggcctttgacgtcgatgacgaagtgccggaggctgaagag
gacgagaagcaggagaccgatgatgatcccgaacgcgacagcctcatcaaagcccccaag
aagggcaaagccgccgcagggaagggtaaagcccctgccaaagcgaagaagagttga
DBGET
integrated database retrieval system
