Dichomitus squalens: DICSQDRAFT_65314
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Entry
DICSQDRAFT_65314 CDS
T03133
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_65314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_65314
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_65314
Enzymes [BR:
dsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DICSQDRAFT_65314
Spliceosome [BR:
dsq03041
]
Complex A
U2 snRNP components
U2 related factors
DICSQDRAFT_65314
Complex B
DICSQDRAFT_65314
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
DICSQDRAFT_65314
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
90S particles
Helicases
DICSQDRAFT_65314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
HA2_N
Helicase_C
AAA_22
AAA_19
SRP54
nSTAND3
T2SSE
Flavi_DEAD
AAA_30
ResIII
ABC_tran
AAA_7
PhoH
SLFN-g3_helicase
AAA_23
UvrD-helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
18843368
NCBI-ProteinID:
XP_007368001
JGI:
65314
UniProt:
R7STJ3
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MGFDNPYTNAPPIGRNPLHGILPRKATAEQVIRAMESDVNPFNKQPHKPQYKRLLERRKE
LPVFGQMSEFLKMFTQNQIVVVVGETGSGKTTQIPQLVCYSDLPHTKGQIVACTQPRRVA
AMSVAERVANEMDVSLGKEVGYSIRFEDMNEPGATFLKYMTDHTLLREAMNDPDLKQYST
IILDEAHERTLATDLLMAFLKDLAQRRSDLKLVVMSATLDAHKFQKYLSIAGPSKPAPLF
KIHGRTHPVEVFYTQEPEADYIEAAIRTVLMIHRAEGPGDILLFLTGEEEIEDACRRIKF
EADDLANQDPQSIGPLVCIPLYSSLPPQQQQRIFDPAPPSRAPSGPPGRKVVVSTNIAET
SLTIDGIVYVVDPGLSQVKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYT
QSDFKTELEEQTHPEILRSNLANAVLELAKLGVKDLVHFDYVDAPALESLMRALELLNYL
VALDDEGNLTPLGAIMADFPLDPQMAKMLIVSPEFNCSDEILTIVAMLSVPSVWRRLPNQ
QKEADVAKALLTIPDGDHLTLLNVYNSYISNKHDRNWCWNNYLGARALQEAENVRAQLQR
TMERYDIELVTTQDERKLWQSIRKALVCGFFMQVAHKEGEKGGYLTVKDNQVVSLHPSCG
LDSSPEWVIFNEFILTTKPYIRTVTEVRPEWLLEFAPNYFDLSTFPAGETKRALQSVLKK
RTLKAVDGTGTGSVSTRSNKHDAEPKKKPKKQRSRAQRSGGG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgacaatccatacaccaatgcccctcctattggcagaaatcctcttcatggc
atccttcccaggaaagcgaccgcagagcaggtcatcagagccatggagagcgatgtgaac
ccattcaacaagcagcctcacaagccccaatacaagagacttcttgagcgccgtaaagag
cttcctgtttttggtcagatgtccgagttcctgaagatgtttacgcaaaatcagatagtc
gttgtagtcggcgagactggctcaggaaagacgactcagattcctcaactcgtctgctac
tctgatctcccgcacacaaagggtcagatagtcgcctgtacgcagccaagacgtgtcgct
gctatgtcagtggctgagcgcgtcgcaaacgagatggacgtgtcgctcgggaaggaagtg
ggttactctatacgcttcgaagatatgaacgagccgggagccaccttcttgaaatacatg
accgaccatacgctccttcgagaagccatgaacgatcccgaccttaaacagtattccact
atcatcctcgatgaggcacacgagcgtactctggccacggatctcctcatggctttcttg
aaagacctcgcacagcgtcggtcagacttgaagctagtcgtcatgtccgccactctcgac
gcccacaagtttcagaagtacttgagcattgccggacctagcaaacctgcgccgttgttc
aagattcatggtcgcacacatccagttgaggtcttctacacccaggagcccgaagcggat
tacatagaggccgcaatacgcacggttctcatgatacatcgtgcggaaggacctggcgat
atcctgctgttcctgactggtgaggaggagattgaggacgcgtgtcgtagaatcaaattc
gaagcggacgatctcgccaaccaggatccacagagcatcggaccacttgtttgcattccc
ctctattcctccctccccccacagcagcagcaacgcatcttcgatcccgcacccccatcc
cgcgcgcccagcggtccgcctggtcggaaggtcgtcgtgtctacgaacatcgccgagacg
tcgctcacgattgatggtatcgtctatgttgttgaccccggtctctcacaggttaaagtg
tataatccgcgtattcgtgtcgaatccctgctcgtgtcccccatctccaaagcttctgcg
cagcagcgtgcgggacgcgctggtcgtacacgaccgggcaagtgtttccggctgtacacg
cagagcgacttcaagaccgagctcgaggagcagacgcaccccgagatcctccggagcaac
ctcgcgaacgccgtgcttgagctggcgaagcttggcgtcaaggatctggtacacttcgac
tacgtggacgcgcctgcactggagtcgctcatgcgtgccttggagctgctcaattatctt
gttgcactggacgatgaagggaacctgacgcccctaggcgcgatcatggcggacttcccg
ctagaccctcagatggcaaagatgctgattgtcagccccgagttcaactgtagcgacgaa
atactaacgatcgtggccatgctttccgtgcctagtgtctggcgtcggctaccaaaccag
cagaaggaggcagacgttgccaaggcacttctcacaatcccggatggcgaccatttgacg
ctgctgaacgtctacaattcctacataagcaacaagcacgataggaattggtgctggaac
aactacctcggggcgcgcgcactccaagaagcggaaaacgtccgcgctcaattgcaacgg
acgatggagcggtatgatatcgaactcgtcacaacgcaggacgaacgaaagctgtggcag
agcatccgcaaggcgctcgtgtgcggcttcttcatgcaggtcgcgcacaaggaaggcgag
aagggcgggtacctcactgtaaaggacaatcaggtggtgtcgctgcacccgagctgcggc
ctcgactcgtcaccggagtgggtgattttcaacgagttcatcttgacgacgaagccgtac
atccggacggttaccgaggtgcggccggagtggctgttggagttcgcgccgaactacttt
gacctgtcaactttcccggcaggcgagacgaagcgggcgctgcagtccgtgctgaagaag
cgcacactcaaggctgttgacggcaccggcaccggcagtgtgtccactcgcagtaacaaa
catgacgcagagcccaagaagaagccgaagaagcagcgttctagagcccaacgttccggg
ggtggctga
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