Dichomitus squalens: DICSQDRAFT_66354
Help
Entry
DICSQDRAFT_66354 CDS
T03133
Name
(RefSeq) SPOC domain-like protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
dsq
Dichomitus squalens
Pathway
dsq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DICSQDRAFT_66354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_66354
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
DICSQDRAFT_66354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA
Gag_spuma_N
Motif
Other DBs
NCBI-GeneID:
18843449
NCBI-ProteinID:
XP_007368428
JGI:
66354
UniProt:
R7SRI2
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MFLVDISPSMGKMREVEVPASSGGESEVIEMTNLEWSLQFVMLKIQEMVCPTRRLVTQIF
NGRKTDKCGVILFGSEETNNMINDANGGYEHVAEYIPIAQPNSATLAKLAALEPSTVSGD
PIDALIVAIETQDQYLGNKKTWTRKVVILTDGESPIEVEDWEATVNKMNALDISLTVVGV
DFDDDDLPFHEEDKSNIKQKNEAFYRTFTSKLHAGVVGNCDYALQEISRPDVRQVKSTLM
GTVLRIGDTQVRPEEAIEISVKTSKCTALARPKSWKRFGRRKPLAAGKDKEKHKDAMDED
EQTMTFVQLRMRTAYYLEQNKGSKAEEKKEKDDLKNLVKVQKEELVRGYKYGATFLPVAD
GGYPRLHTRKGIDICGFFQKKNFRRELEMGEVYYVWADPANPMQQVALSSIVQAMYEKGV
MAIARWVSKDDMDPKMGVLYPSVFEEVDCLLWVQVCGSLNAMPFADDIRNFPFASLETLI
NKKGEVVTEHPYLPTNEQMDAMEQFVDAMDLSDAGEKDEEGNREPWFDTRLSYNPAIHRT
KQALFHSAIVQDLNTHPLPPPHPELLKYMDPPRRVLKRARTAIEECKKTLKVREVPKKVA
RVRKDEHVRAPDEDEDMLLLDQKPARGSPSSKKNTEARSQYGSQTQTQTSPSRTQKKAAA
MDVGSSETEEEAEELLLDKQTPARKPDRDRGPLPTPARMPGRIIGLSFPLEDFKKNISRG
DVVTKAVEDLAWVIQEILTRPFSTRRYDELIECMQELRKVSLEEDEIEAWNTFIQDLRET
CLEKEPGNKAFWDKVRQVGRPLSFISSPEASKAGGKSAMPESEAQKVCFLWIILAATFSI
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcgacatctcgccttccatgggcaagatgcgagaagtagaggtcccagca
tcgtccggcggcgagtccgaggtcatcgagatgaccaacctcgagtggtcactgcagttc
gtcatgctcaagatacaggagatggtctgtcccacccgacgattagtcacccagatcttc
aatggacgcaagaccgacaagtgtggcgtcattctcttcggtagcgaagagacgaacaac
atgatcaacgacgctaacggtggctacgaacatgtcgcggagtacatccccatcgcccag
cccaactcggctaccctggccaagctcgccgcactcgagccgtcgaccgtctctggggac
cccatcgacgctcttattgtagctatcgagacccaagaccaatacctcggcaacaagaag
acgtggacacgcaaagttgtcatactgaccgacggcgagagccccatagaagtcgaggat
tgggaagccaccgtcaataagatgaacgcgttggatatcagcctcacggtggtaggcgtt
gacttcgacgacgacgacctgcccttccacgaagaagacaagagcaacatcaagcaaaag
aacgaagccttctaccgcaccttcacctccaagctccacgccggcgtcgtcggcaactgc
gactacgccctgcaagaaatctcccgccccgacgtccgccaggtcaagtctacgctcatg
ggcaccgtcctccggatcggggacacgcaagtacgccccgaggaggcgatcgagatcagc
gtcaagacgagcaagtgcaccgcgctcgcgcgccccaagtcctggaagcgcttcgggcgc
cggaagccccttgcagcaggcaaggacaaagagaaacacaaggacgcaatggacgaggat
gagcagacgatgacgttcgttcagctgcgcatgcgcacggcgtactacctcgagcagaac
aaaggcagcaaggctgaggagaagaaggaaaaggacgacctcaagaacctcgtcaaggtg
cagaaggaggagctcgtgcgcgggtacaagtatggcgcgacgttcctgcccgtcgccgac
gggggctacccgcgactgcacacgcgcaagggcatcgacatctgcggcttcttccagaag
aagaacttccggcgcgagctcgagatgggcgaggtgtactacgtctgggcggaccctgcg
aacccgatgcagcaggtcgcgctgtcgagcattgtgcaggcgatgtatgaaaagggcgtc
atggcgatcgcccggtgggtgagcaaggatgacatggatccgaagatgggcgtcctctac
ccttcggtgttcgaagaggtggattgcttgttatgggtacaggtctgtggctccctgaat
gccatgcctttcgcagacgatatccgcaacttcccctttgcatccctcgagacgctcatc
aacaagaaaggcgaagtcgtaacagagcacccatacctgccaaccaacgagcagatggat
gcgatggagcagttcgtagacgccatggacctctccgacgcaggcgagaaagacgaggaa
ggcaaccgcgaaccctggtttgacacccgcctatcttacaacccggccatccaccgcacg
aaacaagcgctcttccacagcgcgatcgtccaagacctcaacacccacccgctccccccg
ccccatcccgaactgctcaaatacatggaccccccgcggcgcgtcctcaagcgcgcacgc
accgccatcgaggagtgcaagaagacgctcaaggtccgcgaggtgcccaagaaggtcgcg
cgcgtgcgcaaggacgagcacgtccgcgcacccgacgaagacgaggacatgctcctgctc
gaccagaagcccgcgcggggcagcccgtcgtcgaagaagaacacggaggcgcggtcgcag
tacggctcccagactcagacccagacaagtccgtcgcgcacgcagaagaaggcggctgcg
atggacgtcggcagcagcgagacggaggaagaggcggaggagctcctgctcgacaagcag
acgcctgcgaggaagcctgacagggaccgtgggcctctgccgacgcctgcgcggatgcct
gggcggatcatcgggctgtcgttccccttggaagacttcaagaagaacatctcgcgaggg
gacgttgtgacgaaggcggtggaggaccttgcgtgggtgatccaagagatcctcacccgg
ccgttctcgacaagacgatacgatgagctaatcgagtgcatgcaagagctcagaaaagtc
tctcttgaggaggatgagattgaagcttggaatactttcatccaggatctccgggaaacg
tgtctcgagaaggagcccggaaacaaggcgttctgggacaaggtccgccaggttgggcgg
ccactgagcttcatttcatctccagaagcttcaaaggcaggaggcaagtcggctatgcca
gaaagcgaggcacagaaggtatgctttctctggatcatccttgccgcgacattcagcatc
taa
DBGET
integrated database retrieval system