KEGG   Dichomitus squalens: DICSQDRAFT_69622
Entry
DICSQDRAFT_69622  CDS       T03133                                 
Name
(RefSeq) DNA-directed RNA polymerase II
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
dsq  Dichomitus squalens
Pathway
dsq03020  RNA polymerase
dsq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DICSQDRAFT_69622
  09124 Replication and repair
   03420 Nucleotide excision repair
    DICSQDRAFT_69622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsq03021]
    DICSQDRAFT_69622
   03400 DNA repair and recombination proteins [BR:dsq03400]
    DICSQDRAFT_69622
Transcription machinery [BR:dsq03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     DICSQDRAFT_69622
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DICSQDRAFT_69622
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L Rio2_N
Other DBs
NCBI-GeneID: 18843651
NCBI-ProteinID: XP_007369873
JGI: 69622
UniProt: R7SMH1
LinkDB
Position
Unknown
AA seq 142 aa
MNAINRYELYVLDEGEKSVEVTEDTKIPNAATIKIVKQDHTLANLLRSQLLGYPSVLFAG
YKAPHPLQPHFLLKIQTDGSITPAAILEKACTDLIGMVATLESKFKREFTMNNVEGGVQE
DAYGVPTSGAQWESGGSYVDLG
NT seq 429 nt   +upstreamnt  +downstreamnt
atgaatgccatcaatcgatacgagctatacgttcttgatgaaggggagaagtctgtagag
gtgactgaggacaccaaaatccctaatgccgcgacaatcaagatcgtgaagcaggaccac
acacttgcgaacctcctacgctcacaactcctcggctacccgagcgtcctctttgctggc
tacaaggccccccaccctctccaaccccatttcctcctgaagatccagacggacggtagc
atcacccctgccgcgatcctcgagaaggcgtgcacggatctcatcggtatggtcgcgacg
cttgagagcaagttcaagcgcgaattcacgatgaacaacgttgagggtggcgtgcaggag
gacgcatatggcgtgccaacctcgggagcgcagtgggagagtggcggatcgtacgtagat
ttgggttag

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