Dichomitus squalens: DICSQDRAFT_70401
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Entry
DICSQDRAFT_70401 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsq04131
]
DICSQDRAFT_70401
Membrane trafficking [BR:
dsq04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
DICSQDRAFT_70401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40
zf-RING_16
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
WD40_WDHD1_1st
WD40_RFWD3
WDR55
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
DZR
FrsA-like
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
RWD
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
18843713
NCBI-ProteinID:
XP_007370273
JGI:
70401
UniProt:
R7SMP3
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MPASTATTIRPDVEGPPSPEDGTNLKRSLQIDMKVLMGDAVGNMSISPDNRDVVLAARKG
LFIIDLEAPFHLPRFLPQGGTWDVADVQWNPHPSHNEYIISTSSEKLLIWNLFLGGRTSI
EHVLRSHYRAITDINWHTIEPDIVISTGIDSWQWAWDLRTVQKPIMGLCAFGPGGTQVKW
NRVDGNILASSHSDEVLIWDRRKGSLPIKRIRAHKAKIYGIDWAHDRRNELVTCSLDKTI
KIWDTHTATTNVTINTSYPVWRARDLPFGQGVLSLPQRGETALEMYAHEEPTVPIEKFEG
HTDVVKEFVWRRGGQDNNEFQLITWSKDKTLRFWPVDTETIQAWLLKAGMTPTRTMATAP
SRRDSKVSFSNPPIGNDLPPTLSAPIGFRGILAEVRAPQPHRLVRFAPRESTGHKKAADV
PAHEEQPEWQQARSRPVLVPTTPVTAAAASVKDSGNIGTMSRGPFAGGRSSHITTLQWIS
NVKVGGVRDGSSGPGSGGDSGDVSRIGSRSRPPSVLERSQSVSQARSRPRDASTSREKER
ERAEEYVDPALTLQEEITSVVAKLNSPKLKLERVGLCGKKRTCTFGLQGPWGESTSVFLR
ITFTFPREYPQATFPGGVPTVDLERSPLISMRQRAFILRRLREIREKQRPCLEKCLRFLL
FNDQQEGSGHHATIDSESSSEDEAPTARRGEPTSAVLRGDKNLAEPRTSQGVFGVNGQLV
CFFRAPPRIVRNPLREISVSPSVASRPQNGASRLFQSPALLSDAVKRLSSAAMDRESQSA
ERKRSDDTSSSHNVLRIMDNLFTFSYAHPHAHMMPISQPRRVSDQSRPMEDDYALLPTRR
SSVYIKRTEGILGIPDTEAGAQYALSGRDFAEVCKTNATVARILGRSDHERIFGMLHVLA
SRKGDQNVIMAHGGVDPLLATLATRLYEEMLREKDIQMLVFLSVLLLNPAPHSTPASLSP
GAFVAQRKISLEYFDPRRRSNRQGSPFSPASSNPSTPTLTPGGVLSLNSPSSKGSWSSLF
NAGSMRQLVSARRAMVKRDSARPSSNSPIAKLSWEAPDTLNASMPPLGSKRRPTFSQVLS
GRSTLSEKRHISFQSSADEIPPSFLSPEMRGQLLCHVLAYAEMLLAWQLPEKRGELLKLV
EDDIQRLSPDIVVSDETLYSARIGCGQPNEVEATRCFECRSRLIARCSICRLTVKGLHHL
CSKCLHVSHLKCWQARDDALCATGCGCICALPASEPLSDGMVVLSPIMPVSA
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcatctaccgcgaccaccatccggccggacgtggagggacctccttctccggag
gatggcacgaatctcaagcgtagtctccagatagacatgaaggtgctcatgggggatgcc
gtcgggaacatgagcatcagcccagacaatcgagatgtggtactcgcagctcggaaaggc
ctgttcatcattgatttggaagcaccctttcacctacctcgcttcctccctcaaggaggc
acctgggacgttgccgatgtccaatggaacccgcatccctcgcacaacgaatacatcatc
tctacctcgagcgagaagctactcatatggaatttgttcttgggtgggcgaacgtccatt
gaacacgtactgcggtctcactatcgcgccataacggacatcaattggcatacgatcgag
ccggacatcgtcataagcacaggcatcgactcgtggcagtgggcttgggatctgcgaaca
gtgcagaaacctatcatggggctttgtgcgtttggcccgggcggaacccaagtcaagtgg
aatcgagttgacggaaacatcctcgcctcgtctcattcagacgaggttttaatctgggat
agacggaaagggtcgttacctatcaaacggatacgggctcataaggccaagatctacgga
attgactgggcacacgacaggcgtaatgagctcgtgacctgttccctggacaagaccatc
aagatatgggacacgcacactgcgacaaccaacgtcaccatcaatacttcgtaccccgtg
tggcgcgcgcgcgacctgccgttcggccagggcgtgttgagcttaccgcagaggggcgag
acggcgcttgagatgtacgcgcatgaggaaccaacggtcccaattgagaaattcgagggt
cacacagacgtcgtgaaggagttcgtgtggaggcgtggtggccaagataacaacgagttc
cagctgatcacttggtcgaaggacaagacgttgcggttttggccggttgacaccgagacg
atccaggcatggctcctcaaggcagggatgacgcctacgcgaacgatggctactgcaccc
agccgtagggactccaaagtctccttcagcaaccccccgataggcaacgacctccccccg
acgctctcagcgcccatcggcttccgcggtatcctcgccgaagtgcgcgccccacagccc
caccgtctcgtcaggttcgccccgcgcgagtccaccgggcacaaaaaggccgccgatgtc
ccagcgcacgaggagcagccggagtggcaacaggcgcgctcacggccggtgttagtgccg
acaacgcctgtgacggcggcggcggcgagcgtgaaagacagcgggaatatcggtacgatg
agccgcgggccgttcgcggggggccgctcgtcgcacatcacgactttacagtggatatcg
aacgtcaaggtgggcggtgtccgagatgggagttcggggccggggagcggaggcgatagt
ggggacgtgtcgaggatcgggtcaaggtcgaggccgccgtcggtgttggagcggtcgcag
tcggtgtcgcaggcccgttcgaggccgagggacgcgagcacaagtcgggagaaggagagg
gaaagggcggaggagtatgtggatcctgctctgacgctgcaggaagagatcacttctgtt
gtggctaagctgaactccccaaagctcaagctcgagagggtagggctctgcggcaagaag
cgtacttgtacgttcggcctacagggtccctggggagagtctacgtctgtattcctcaga
atcaccttcacgttccctcgagagtatccccaggccaccttccccggcggcgtccccacc
gtggacttggagcgtagccccttgatctcaatgaggcagcgtgcatttatcctgcgcagg
ctccgcgagatccgcgagaagcagcggccatgtctggagaagtgtctccgattcctgttg
ttcaacgatcagcaggagggcagcggtcaccatgccacgatcgattcggagtcgtcatcc
gaggacgaagcgcctactgcgcgaagaggggaacctacgtccgccgtcctcaggggagac
aagaatctggcagagccacggacatcgcagggggtgtttggtgtcaacggccaacttgtc
tgcttcttccgcgccccgccaaggattgttcgcaatccattgcgtgaaatctctgtatct
ccttccgtcgcttcccgcccccaaaatggtgcgtctcggctcttccagtcgcccgcgctc
ctttcggacgcagtcaaacgactcagctccgccgccatggatcgcgaatctcagtcagcg
gagcgtaagcgaagcgacgacacgagcagctcgcataacgtcctccgtatcatggacaac
ctttttacgttctcgtacgctcatcctcatgcacacatgatgccgatcagccagccgcga
cgcgtttcggatcaatcccgaccgatggaggacgactatgccttgctgcctaccagacgg
agcagtgtttacatcaagcgaactgagggcatcctcggtatcccggatactgaggcgggg
gcacagtatgcgctgagcgggagggactttgcagaagtatgcaaaaccaatgcgacagtc
gcgcggatacttggtaggagtgatcatgagcggatctttggcatgttgcatgtgctggcg
agcaggaagggggatcagaacgtcataatggctcatggtggagttgatccgttgctggct
acgttggctacaagactgtacgaagagatgctgagagagaaggatattcagatgctcgta
ttcctttctgtccttcttctgaatcctgcgccgcactcaacacctgcctcgctctcgccc
ggtgcattcgtcgcgcagcgtaagattagcttggagtacttcgatccgcggagacgtagc
aatcgccagggcagcccattctctcctgcttcgtcgaacccctccacccccacccttaca
ccgggaggcgtgttgtctcttaactcgccttcttccaagggttcgtggtcaagtctgttc
aatgcaggcagcatgaggcagttagtatccgctcgacgcgcgatggtcaagcgcgacagc
gcgcgcccgtcgtcaaactcgccgattgcgaagttgtcctgggaagcaccggataccctg
aacgcgtccatgccgccattagggtccaagaggcggccgactttctcgcaggtgctgtct
ggacggtcgacgctgtcggagaagcgacatatatcattccaatcttctgcagatgagata
cctccatcgttcctgtcccctgagatgcgggggcaactgttgtgtcacgtactcgcttat
gccgagatgctgctcgcgtggcagctccctgaaaagcgcggcgagctactcaagctagtc
gaggatgacatacagaggttgtctcccgacattgtcgtgtccgatgagacgctctactct
gcacgaatagggtgcggacagcccaacgaagtagaagctacgcgatgttttgagtgtcgc
agtcggctgattgcccgttgctcaatctgtcgtctgactgtgaaggggttgcatcacctc
tgctcgaaatgtctccatgtttctcatctcaagtgctggcaggcacgggacgacgcgctg
tgtgcgaccggctgcggttgcatatgtgctctgccagctagcgagcctcttagtgatggg
atggttgtgctctcgcccatcatgcctgtatccgcgtag
DBGET
integrated database retrieval system