Dichomitus squalens: DICSQDRAFT_71986
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Entry
DICSQDRAFT_71986 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_71986
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DICSQDRAFT_71986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Htt_N-HEAT_1
Condensin2nSMC
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
18843834
NCBI-ProteinID:
XP_007371064
JGI:
71986
UniProt:
R7SJ88
LinkDB
All DBs
Position
Unknown
AA seq
2012 aa
AA seq
DB search
MYSLLVSFSSRPDTTPRVLDPVYKLLKDSLLSHSRSLRLNALRILTSPLVQAPEGTAELL
QKALQAEEISIDVQGVRERVLRIGRLPLMVKDGDDVAAEICARWLIAQLKVNLRPLWSPA
ASALSTLAGRFGDLVWVLLFEEVKGASWGSTGTVSKPAWMQDVAEESDNVWEEERSWRDP
SAHKLRMAIAKWSCHRAAQHSIVQRQAIGDRLDATTYETQLLAVLEECSSLAEKHNRDLI
PHFLSLAGPDAPSKLPRYKLSAWLKLFSKFNNPNAFRSTETMRALYISHLSHPDRGLQRL
ALSCLLTFKSPRLLPHEESLRLLLDDTRWRDELTQLDFAQLEADERPELVGVIIRLLYGM
MLEKRGRTRGADRRAAVLSSLAGCSDEELTLLVDLMLQPLRKEQSMEVESGPFVIRPVPE
GVLEKQQVGFLTLLGDLLKHLGPRVVNRWQALLETVLHLIAGAQGALDAQKDGRVDDPME
DEVTEAEEEDREEPMGSLRTLRNIRQLGLKRLADFSRCPVVYDFSLYMPEAFRAAISPRL
PSLDVENTQAPGALLDLFHAWAQRREYASYLVQYDDSVLPKVYDCLTATNVKPVVVSKVF
DIVEQLQSHAVADDAILDTVFKPHVSHLLRNLSTLVSRSNGNVSAAIDVLGRRQITILSE
LAPYLSDSSQATMLLELFSPLLRKPHQVVPEKVKVDMTTILCSLFPLIQDLSDASSAVYS
KTYSLLSQLFQILRSRPSRIALIQSFYALARVQPTIEPLAQLMESLNAYSTKRLDEPDFD
RRLTAFAELNDSLYGTFSCGEWLPVIYNSLSFIQDPLELTIRSNAATALKRFIDSVADER
GEYEETFLKVLYPGLKNGLHSKAELVRTEILGVISHAVARCDGIASLQEMRILLAGGDEE
ANFFNNIHHIQIHRRGRAIRRLVEHVNEGHLRSATLAEVFIPLVGNYIVPTDTLDHHLVN
EAVNAVGQMARRLSWGAYHALVQRYMKRAKQKDAAERVYVRTIVAVLDSFHFPMEEVVSS
DEAQTMESADAEGEEALAEPKPLPEPVRDTTKLARIQDAVNTRLLPSLILYLEKRDETED
SLRIPVAVGIVQIAKHLSPESRDAQITKLLTVLSQALRSKSQETRDLVRDTLCRIACILG
PGYLPLLIREMRAALLRGPHLHVLAYSVHTLLVHVTTGDHASAFETLDDCVIDVAAVSAE
VIFGESGKDVQAEGFKTKMREVRGSSSKGVDSFALLAKYITPPKISSLLLPIRNILQETE
TLKVMQQVEELLRRIAGGLNSNAHLVPAELLVLCHTLISQNARFLKDVPKTELRGKGVKR
TDHAIVQLKRRSAHDSDHYANNSFRFVVFGLELFNTAYRRGRFDFKDANMMSRLEPMVAV
IGNTLYSSHMQVVGPGLKAAAAIVKCPLKSVDKALPVFIRQIIDVIRQAGSTEPEAIQTA
FKSLATILRDHPGAQVKEKDLVYLLELLTPDLEEPCRQAAVFTMLRAIVARRFVVPEIYD
IMDKVADIMVTSQSPSVQELCRGALLQFLLDYPQGKGRLKNQLTFLVKNLTYVHESGRKS
VMELLSAMVAKFETGLVQEYSDLLFVGLVMVVANDESAKCREMAAELIKALLTRLGTKQR
NVIMSHVHSWSVQQAQPQLTRVSAQMYGLIVDFLKSDVASHMSAILEDMNSLLRRSAFAL
EAASSPREVSDHHGNDVLAQGWQTPYHTLLVFSKALREEPGLATEDGGVDWSSVVTLLLF
PHAWVRTAACRLLGSLFAAVPVSAPKSGESLFSRAAMEEIAAKLSLQLKSENLDEQLSLQ
IVKNLFYVGKCFCALELQPSGMQVPVDDMHDTSEGDQTEELEDMDDDSLQNGEHHPLSRL
FSRLSYQARASLIRRRSKARSAANWSQQPAAVLKWFAAMVSYMDGDVVEQFLVHILNPVY
RIVEDDTVRDPQMEELKTLAVELQDLVQTKVGTSRFSNVYNGIRQQVLSVRRDRKAARVI
QSTTDPVVAAKRRLQRNAAKKQSRKRKNEEFL
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgtattcactcctggtgtccttttccagtcgtcccgacaccacgccgcgtgtcctcgac
ccggtctacaagttgctgaaggactcgctactatcccattcgcgctcgctacgactcaat
gcgttgcgtatcctgacctcgccgcttgttcaagcccccgaaggaacagcagagctcctc
cagaaggctctccaagcagaggaaatctccatcgacgtgcagggcgtgcgcgagcgcgtg
ctccgcatcgggaggctgccgctgatggtgaaggatggcgatgacgtcgcggcggaaata
tgcgcgcgttggttgatcgcccagctgaaggtcaacctgcgtccgctgtggagcccagcg
gcctccgcgctgtcaacgctggctggtagattcggtgatctggtttgggttcttctgttt
gaggaggtgaagggggcgtcatggggatcgaccgggacggtctccaagccggcgtggatg
caggatgtcgccgaggagagcgacaatgtctgggaagaggagcggtcatggcgagatccc
agcgcacataaacttcggatggccattgcgaagtggagttgtcatagagctgcgcagcat
tctattgtgcagcgccaggctataggtgaccgactggacgcgacgacgtacgagacgcag
ctgctagcggtgctcgaggagtgctcatctctggccgagaagcacaatcgtgacctaatt
ccacacttcctctcactagccggacccgacgcgccctcgaaactcccccggtacaagctc
agcgcgtggctcaagcttttctccaagttcaacaatccgaacgcgttccgctcgacagag
acaatgcgcgcgctgtacatctcccacctctcccatcccgatcgcgggctgcagcggctc
gcgctctcgtgtctcctgacgttcaagtctcctcggctgctcccgcacgaggaatcgctc
cggctgctgctcgacgacaccaggtggcgtgacgagctcacgcagctcgactttgcgcaa
ttggaggcagacgaacgccccgagctggtcggcgtgatcattcgtctgctctatggcatg
atgcttgagaaaagggggcgcacgcggggagcggaccggcgcgcggcggtgttgtcttcc
cttgcgggatgctcggacgaggagttgacgctcctcgtggacttgatgcttcagccgctg
aggaaagagcagtcgatggaggtcgaaagcggtccgttcgtgatacgtccggttccggag
ggggtgttagagaagcagcaggtcgggttcttgaccctgctcggggacctcctcaagcat
cttggcccgcgggtggtaaaccgttggcaggcccttcttgagacagtgctccacctgatt
gcgggcgcacaaggtgccctcgatgcacagaaggatggtcgcgtcgacgaccccatggaa
gatgaggtcaccgaagccgaggaagaggaccgcgaggagccgatgggatcgttgaggacg
ctgaggaatatacgccagctcgggcttaagcgacttgcggacttctcccgttgtccggtc
gtttatgacttctcgttgtacatgccggaggcgttccgagcggccatctcccctcgactc
ccttctctggacgtcgagaatactcaggcgcccggggcattgctcgacctcttccacgcc
tgggctcaacgtcgggagtatgcctcatacctggtgcagtatgacgactctgtcctcccc
aaagtgtacgactgtctcaccgcgacaaacgtgaagccggtggtggtctccaaggtgttt
gatatcgtcgagcagctacagtcccatgctgtcgccgacgacgccatacttgacacagtc
ttcaagccccacgtatctcacctcttgagaaacctgtccacacttgtctcgcgctcgaat
ggcaacgtctccgccgcaatcgacgttctaggccgtcggcaaatcacgatactctctgag
ctcgcgccctacctgtcagattcatctcaggctacgatgcttctcgagctgttctcgcct
ctcttgcgtaaaccccaccaggttgtccctgagaaagtaaaggtcgatatgactaccatc
ttgtgcagcctcttccctctcattcaagacctgtcggatgctagcagcgcggtctacagc
aagacgtattctctgctgtcgcaattgtttcagatcttgcggtctcggccctcacgcatc
gcccttatccagtcgttctatgccctcgcacgagtccagccgactatcgaaccgcttgcg
cagcttatggagtcgctcaacgcgtactccaccaagcgtctcgacgaaccagattttgat
cgtcgtttgactgccttcgccgagctcaatgactcgctgtacggaacgttctcttgtggc
gaatggcttccggtcatctacaactcgctcagcttcatccaggacccgctcgagcttacc
atccggagcaatgcagctacagcgctcaagcgattcatcgactcggtggcggacgagcgg
ggcgaatacgaggagacgttcttgaaagtgctctatccaggtctcaagaacggattgcac
tcgaaggcagaacttgttcgcaccgaaatcctcggcgtaatttcccatgcagtcgctcgg
tgcgacggtatcgcgtctttgcaagagatgcgcatcttgcttgccggcggagacgaagag
gccaactttttcaacaacatccaccatattcagatccataggcgcggtcgtgcaatccgt
cgattagtggaacacgtcaacgaaggccatcttcggagcgccacgctcgcggaagtgttc
atcccgctcgttggcaactatatcgtccccactgacaccctcgatcatcatctcgtcaac
gaagccgtcaacgccgtgggccagatggccagacgactcagctggggcgcgtatcatgct
ctcgtgcagcgttatatgaaacgagccaagcagaaggacgcggccgagcgcgtctacgtc
cggactatcgtagccgttctcgatagctttcattttcctatggaggaagtcgtcagctcg
gacgaagctcagactatggagagcgcagacgcggagggcgaagaggccctagctgagccc
aagccccttcccgagccggttcgagacactaccaaacttgctcgtatccaggacgcggtt
aacacgcgtcttcttccgagcctgatcctatacttggagaagcgtgatgagaccgaggat
agcttgcgaatacccgttgccgtcggtatcgtccagatcgccaagcatctgtctcctgag
tctcgcgacgcccagatcaccaagcttcttaccgtgctcagccaggctctgcgcagcaag
tctcaggaaactcgggacctggttcgggataccctctgtcgtatcgcttgtatcctagga
cctggctatctgcctcttctgatccgtgagatgcgggccgcgctgcttcgtggtccccat
cttcatgtgctggcctactccgtccatactctgcttgtgcacgtcactactggggatcac
gcttctgctttcgagacgctcgatgactgcgtcattgacgttgctgccgtctccgcggag
gtcatctttggtgagtcaggcaaggacgttcaggccgaaggattcaagacgaagatgcgg
gaggtcaggggatcgtcgtcgaaaggtgtcgactcgttcgctctgttagcgaagtacatt
acgccaccgaagatcagcagtcttctcctgcctatccgcaatatcctacaagagacggag
acgctgaaggtcatgcagcaggtagaggagctcctccgacgcatcgcgggtggcttgaac
tccaatgcgcatctcgtcccagccgagctattggtgctgtgtcatacgctcatcagtcaa
aacgctcgctttctcaaagacgtcccgaaaaccgagctccgtggtaaaggcgtgaaacgc
acagaccacgcgatagtccagctgaaacgtcgttcagctcatgatagcgaccattacgcc
aacaactcgtttcgctttgttgtcttcggcctggagctctttaataccgcttatcgccgt
ggtcggttcgatttcaaggatgcgaatatgatgtctcgtctggagcccatggtggctgtc
atcggaaacactctctattcgtcgcacatgcaggtcgttggtccaggcttaaaggccgcg
gccgcaattgtcaaatgcccgctgaagtccgtcgacaaggctctacctgtcttcatacgt
caaattatcgatgtgatcaggcaggcaggctccaccgaacctgaagccatccaaaccgcc
ttcaagtcgctggccaccattctccgcgaccatccaggggctcaagtcaaagagaaagat
ctcgtctacctactggagcttctgacacccgacttggaggagccttgccggcaggccgcc
gtcttcaccatgctacgcgctatcgtcgcacgccgcttcgtcgttcccgagatctatgac
atcatggacaaggtcgcggatatcatggtgacgagccaatctccctcagtgcaggagctc
tgtcgtggtgctcttctccagttcctcctggactatcctcaagggaagggacggttgaaa
aaccagttgacattcctcgtcaaaaacctgacctacgtccacgaaagtgggcgaaagtcg
gtcatggagcttttgtccgcgatggtcgccaagttcgagactggactagttcaggagtac
tccgacttattgttcgtcgggcttgtcatggtcgtcgcgaacgatgagtcagccaaatgt
cgggaaatggcagcggagctcatcaaagccttattgacgcgtctagggaccaaacagcgc
aacgtcatcatgtctcacgtgcattcgtggtcggttcagcaagctcaaccccagctcacc
cgcgtatctgcccaaatgtatgggctcatcgttgactttctcaagtccgatgttgcttcg
cacatgtcggcgatcctagaagacatgaactctcttctccgtcgtagtgcttttgcgctc
gaggctgcgtcgtctccccgcgaggtctcagatcaccacgggaacgatgtcttggcacag
ggctggcaaacgccatatcataccctacttgtcttttccaaagccctccgtgaggaacca
gggctcgctactgaggatgggggagtcgactggtcctcggtggtgacgctccttctgttc
cctcacgcctgggttcgcacagccgcttgccggctccttggatcgctctttgctgccgta
cctgtatcagcgccgaagagtggcgagtctttgttctctcgtgctgccatggaagagatt
gcggctaagctgtcgttgcagctgaagagcgagaatctcgatgagcagctcagtttgcag
atcgtcaagaatctcttctatgtcggaaagtgcttctgtgccttggagctacagccatct
ggcatgcaggtccctgtcgatgacatgcatgacacttcggaaggggaccaaacggaggaa
cttgaggacatggacgacgacagtctgcaaaacggagaacatcatccgctttctcggtta
ttctcgcggctgtcttaccaagctcgcgcttcactcattcgccgtcgtagcaaagccaga
agtgcggcgaattggtctcagcaaccggcagctgtcttgaagtggtttgcagcgatggtg
tcctatatggatggtgatgtcgtcgagcaattccttgtgcatattttgaaccctgtctat
cgcattgtcgaggacgataccgtacgggacccgcagatggaggaactcaagacgcttgcc
gttgaactgcaagacctcgttcagaccaaggtcggcacgtcgaggttctccaacgtctac
aatggtatccggcaacaagtccttagtgtccgtcgggatcgaaaggccgcgcgtgtcata
cagagtactacggaccctgttgttgcagcgaagcgcaggctccagaggaacgctgccaag
aagcaaagtcgcaagagaaagaatgaggaattcttgtag
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integrated database retrieval system