Dichomitus squalens: DICSQDRAFT_77169
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Entry
DICSQDRAFT_77169 CDS
T03133
Name
(RefSeq) SNF2 family DNA-dependent ATPase
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
dsq
Dichomitus squalens
Pathway
dsq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DICSQDRAFT_77169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_77169
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_77169
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
DICSQDRAFT_77169
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
DICSQDRAFT_77169
RSF complex
DICSQDRAFT_77169
WICH complex
DICSQDRAFT_77169
B-WICH complex
DICSQDRAFT_77169
NORC complex
DICSQDRAFT_77169
BRF complex
DICSQDRAFT_77169
NuRF complex (fruit fly)
DICSQDRAFT_77169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
AAA_14
DBINO
Myb_DNA-binding
DEAD_2
Motif
Other DBs
NCBI-GeneID:
18844160
NCBI-ProteinID:
XP_007360821
JGI:
77169
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MQASEEKQRRKQKRKDDEGQLAAKRQEMDKAKISDAVKRYSYLLGQTDLFKHFVDIKKAR
DPEYAALLDAQPKPKGRGRKKATDKVARHRKSEKEEDEELLKDGEMAADGNDQPFVFEES
PSYIHGTMRPYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLSYLRHYRDISGPH
LVVVPKSTLQNWSREFALWTPDVSTVLLTGSKDERAEIISMRLIPQDFDVLITSYEVCLI
EKSALKKFSFEYIVIDEAHRIKNVDSILSQIVRSFLSRGRLLITGTPLQNNMKELFALLN
FICPEIFSDYADLESFLHKDDADAEGDEEKSKKVVEALHKILRPFLLRRVKSDVEKNLLP
KKEINIYVGLTEMQRKWYRSVLEKDIDAVNGLTGKKEGKTRLMNIVMQLRKVTCHPYLFD
GAEPGPPYTTDEHLVENSGKMVILDKLLKNMKAKGSRVLIFSQMSRMLDILEDYCLFRGY
KYCRIDGGTAHDDRIVAIDEYNKPDSEKFIFLLTTRAGGLGINLTSADVVVLYDSDWNPQ
ADLQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKLRLDQLVIQQGRTQATKAAN
KEELLEMIAHGAEHIVNSNDDLMINDDIDAIIQRGEERTQQLNSKYETLSFEDLSNFKSE
ASVQQWEGEDFRGNRKTLQFNPLSLSKRERKLNYSVDSYFKETMRAGPSKTEKPPKIPRA
PKQIQMQDFQFFPPRLAELQEQEMAAHKRLNDIPAVTREPATEDDTPEKLEEERKAAQEF
IDNAEPLTEEQLQEKEQLIAQGFEDWSRRDFQQFVRALETYGWTDDYELLASEIQDKTAE
DVARYYPVFKKKWKELSEYPRIKARIEEGEAKRNKRSNLEALLAKKIASVKYPMQELELN
YPTTKGKVYSEEEDRYLLCRLNHYGMQAEDVYERIKKDITEFPVFRFDWFFKSRSPQELQ
RRCNTLLGMIEKEAEGKQAEEVKTKGTKGKKRGIEQVKEEDKAEASRSSTPSTTAISGKR
GPKKRKT
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatctgaggagaagcagaggagaaagcagaagcggaaagatgatgagggccaa
cttgcggcgaagcggcaagaaatggacaaggcgaagatatccgatgctgtaaagcgctat
tcctaccttctcggtcagaccgacctcttcaagcactttgtagacattaagaaagcgcgc
gaccctgaatatgccgccctgctcgacgcgcagccgaagcctaagggccgtggcaggaaa
aaggctactgacaaggtcgcccgtcatcgaaagtcagaaaaggaggaggatgaagagctg
ctcaaagatggagaaatggctgcagacggaaacgaccagcctttcgtatttgaggaatca
ccaagctacatccatgggacgatgcggccatatcagctccaaggcttgaattggatggtg
tcccttcaccacaatggtctcaatggaatcctcgctgacgaaatgggtcttggcaagaca
ctccaaactatttcgttcctctcatacctccgccactaccgcgacatctctggacctcac
ctcgttgtcgtacccaagtccacacttcaaaattggtcgcgtgagtttgccttgtggacg
cccgacgtgagcaccgtgctgctcaccggcagcaaggacgagcgcgcggagataatctcg
atgcgcttgatccctcaggacttcgacgtactcattacgtcgtacgaggtctgtctcatc
gaaaagagtgcactcaagaagttctcgttcgaatacatcgtcatcgacgaggcgcaccgc
atcaagaacgtagactcgatcctctcccagattgtgcgctcgttcctttcccgcggacgg
ctgctcatcacgggcacgccgctgcagaacaacatgaaagagttgttcgcgctgctcaac
ttcatatgtcccgagatcttctcggactatgcggacctggagagtttcctgcacaaggac
gatgcggacgcggagggcgacgaggagaagagcaagaaggttgtcgaggcattgcacaag
atcctgcggccgttcttgctccggcgtgtcaagagtgacgtcgagaagaacttgcttccc
aaaaaggagatcaatatctacgttggcctgactgagatgcagcgcaagtggtacaggtct
gtacttgagaaggacatcgacgccgtgaacggcctcacaggcaagaaggagggcaagacg
cggcttatgaacatcgtaatgcagctccgcaaagttacctgccacccgtatctgtttgac
ggcgcagagccgggccccccttacacgacggacgagcacctggtcgagaattcgggcaag
atggtgatcctagacaagctgctgaagaacatgaaggccaaggggtcacgcgtgctcatc
ttcagccagatgagccggatgttggacatattggaggactactgtttgttccgtggatac
aagtactgccgaatcgacggaggcacggcgcacgacgaccgcatcgtcgccatcgacgag
tataacaagcccgactcggagaagttcatcttcctcctcacgacccgtgctggtgggctc
ggcatcaacctcacctctgccgacgtcgtcgtcctctatgactcggactggaacccgcag
gcggacctgcaggcgatggaccgcgcgcaccggatcgggcagacgaagcaggtgtacgtg
ttcaggttcatcacggagggaagtgtggaagagcggatgttagagagagcagcacagaag
ttgaggctggaccagctcgtcattcagcaggggaggacgcaggctacaaaagctgcgaac
aaggaagagctccttgagatgatcgcacacggtgccgaacatatcgtcaactcgaacgat
gacctgatgatcaacgatgatatcgatgcgatcattcaacgtggtgaggaacgcactcag
cagctcaacagcaagtacgaaacgctctcgttcgaggacctctccaacttcaagtccgag
gcgtctgtacaacagtgggagggcgaggacttccgcgggaaccgcaagacgctccagttc
aacccgctctcgctctcgaagcgcgagcgcaagctcaactactccgtcgactcatacttc
aaagagacaatgcgcgccggtccgtccaagacggagaagccacccaagatcccgcgtgcg
cccaagcagatccagatgcaggacttccaattcttcccgccgcggctcgcggagctgcag
gagcaggagatggcggcgcataagcgactgaacgacattcctgcggtgacaagggaaccg
gcgaccgaggacgacacaccggagaagttggaggaggagcgaaaggcggcgcaggagttc
attgacaacgccgagcctctcaccgaggagcaactgcaggagaaggagcagctcatcgcc
cagggctttgaggactggagcaggcgcgacttccagcagttcgtacgcgcgctcgagacg
tacggctggactgacgactacgagctactcgcgtctgagatccaggataaaaccgccgag
gacgttgcgcggtactaccctgtgttcaagaagaagtggaaggagctctcagagtaccca
cgcatcaaggcgcgtatcgaggagggcgaggcgaaacgaaacaagcgctcgaacctcgag
gcgctactcgccaagaagatcgcgtcggttaagtacccgatgcaggagctcgagttaaac
tatccgacgaccaagggcaaggtgtactcggaggaagaggaccggtacttgctctgccgc
ctgaaccactacggcatgcaggccgaggacgtgtacgagcggatcaagaaggatatcacg
gagttccccgtgttccggttcgactggttcttcaagagcagaagtccgcaggagctccag
cggaggtgcaacacgctcctgggaatgatagagaaggaggcagagggcaagcaagctgag
gaggtgaagacgaagggcacgaagggcaagaaacgtggcatcgagcaggtgaaggaggag
gacaaggcagaggcctcacgatcgtcgacccccagcacaactgcgatatcggggaagcgc
gggcccaagaagcggaagacatga
DBGET
integrated database retrieval system
