Dichomitus squalens: DICSQDRAFT_78751
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Entry
DICSQDRAFT_78751 CDS
T03133
Name
(RefSeq) condensin complex subunit SMC1
KO
K06636
structural maintenance of chromosome 1
Organism
dsq
Dichomitus squalens
Pathway
dsq04111
Cell cycle - yeast
dsq04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
DICSQDRAFT_78751
04113 Meiosis - yeast
DICSQDRAFT_78751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_78751
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
DICSQDRAFT_78751
Meiosis-specific proteins
Cohesin complex and associated proteins
DICSQDRAFT_78751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
AAA_15
SbcC_Walker_B
ABC_tran
ATG17_like
Motif
Other DBs
NCBI-GeneID:
18844246
NCBI-ProteinID:
XP_007361624
JGI:
78751
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MPLIQIEVCDFKSYRGHQVIGPFRNFTSVIGPNGAGKSNLMDAISFVLGVKSAQLRSSQL
KDLVYRGRRLARNPEEEDGGRAGQEDDEEEGEAEGEGDAKKAWVLAVYEDAAKKEWRFQR
TISTTGASEYKLNSKTVTYSAYNAALIQHNILVKAKNFLVFQGDVEAVASQSPKELSRLI
DQISGSLELAPDYEKAKDALERATENATFNFTKRRGITGEIKQYREQKSEAERFALLCRE
RDDLVLRRILYKLYHIQQSLDEHAQAIRDQNKALVGLRKEQQKHEKALEEARSEQAKSRG
AVMQKEKKIKKAEKALETQRPDLVRIEAQIKHAERKREKAEQELEKLRQTENEQKKRLES
LQTDLETVRRAANAAQEAQRRAAQQNLSLSEESLEEYRRLKASASVLAVDERQSLETLTR
DEKTAARTLSQLKDKLEQQTQKREKLAEEERTLSQKKSELDDKVSELAADLKHVKQEHDN
QQSERIRIEKLEKETNEKLVEIYEKLTQAGVDQQESQREARLKETLSNLQRIFPGVRGRV
VDLCKPTQRKYETAVAVVLGRNIDAIVVDEEKTAIDCIEYMRNQRAGQATFIPLDTIQVK
PINDKFRAFAKGARLAVDVITYDPAVERAMHHACGNALVCDSMEVARYVCYEKGQEVKAV
TLEGTIIHKSGLITGGKSSQTNGKKWEEKDVQGLQRARDNFMAQLLELGKSKPRGKEAEV
LLAEITRLESARTVARDDLGACRAKLNGVKDELKHIDREIRQIQPELRKAQAAYDKIKEQ
VDALASVINEAEDGIFAHFCERIGVNNIREYEERQLKLAQAESEARLQFDTQIARLTHAS
QFAEDQLRMTHERVAQYQEILNTEGGTLARLEEERAEAQNQIAEAEEAIRTLQEELKELT
EELEEKTKRVEEVKKTTNRAAKVLDQALKEIATHNDEIEKLGLERSSIYRKCRLDEIKLP
LVAGNLKNVPMEENLRDEVAMDVDEDDQGTQRVKRVPDYGIEVDFDSLSDKDREDESGDV
LKEIDDAIAKNNAEIERMAPNMKAIERLDDVEAKLQESEKEADKARKDSKNAREQFNEIK
RKRCELFNKAYNHISERIDQVYKDLTKGKMAPTGGVAYLTLEDSEEPYTAGIKYHAMPPM
KRFRDMEQLSGGEKTIAALALLFAIHSYQPSPFFVLDEVDAALDNTNVAKIANYIRVHSS
DTFQFIVISLKGSLYERSNSLVGIYRDQDVNSSRTLTLDLTQYDD
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcatccagatcgaggtctgcgatttcaagtcctaccgcggccaccaagtcatt
ggccccttccgcaatttcacctccgtcattggccccaatggcgcaggcaagtccaacctc
atggatgctatctccttcgtattgggagtcaagtccgcccagctgcgttccagccagcta
aaggacctcgtctatcgtgggaggaggcttgcgcgcaaccctgaggaagaggatggggga
cgggcagggcaggaggatgacgaggaggagggggaggcagagggcgagggggacgcgaag
aaggcgtgggtactggccgtgtacgaggatgcggcgaagaaggaatggagattccagcga
acgatctcaaccaccggcgcgtccgagtacaagctcaacagcaaaactgtgacctactcc
gcgtacaacgccgcgctcatccagcacaacatcctcgtcaaggccaagaacttcctcgtc
ttccagggcgacgtcgaggccgtcgcctcgcagtccccgaaggaactctcccgcctcatt
gaccagatctccggctcgctcgagcttgcacccgactatgagaaggccaaggacgccctc
gagcgcgctaccgagaacgcgacgttcaacttcacgaagagaaggggaattacaggcgag
atcaagcaatatagggaacagaagagtgaggcagagaggttcgcgctgctttgcagggag
cgggacgacctcgtgctcaggcgcatcttgtacaaactctaccacatccagcagtccctc
gacgagcacgcccaggcgatccgggaccagaacaaggctctcgtcggcttgcgcaaggag
cagcagaagcacgagaaggctcttgaggaggcgcggagcgaacaggccaagtcgcgcgga
gccgtgatgcagaaggagaagaagatcaagaaggcggagaaggcccttgagacccagcgg
ccggacttggtgcgcatcgaggcgcagatcaagcatgcggagcggaagcgggagaaggcc
gagcaggaactggagaagttgaggcagacggagaacgagcagaagaagagattggagtcg
ctccagacggatttggagacagttaggagggctgcgaacgccgcgcaggaggcccagcgg
agggccgcacagcagaacctatcgctaagtgaagagtcgttggaagagtatagacgactt
aaggcgtcggctagcgtgcttgcagtggacgagcgacaatccctcgagacacttacgcga
gatgagaagacggcagctcgtaccctgtcgcagcttaaggacaagcttgagcagcagacg
caaaaacgcgagaagcttgccgaggaagaacggacgctcagccagaagaagagcgagctg
gatgacaaggtctctgagctggcggcggacctgaagcatgtgaagcaggaacatgacaac
cagcagtcagagcggatacgtatcgagaaactcgagaaagagactaatgagaagctggtc
gaaatttacgaaaaactcacccaagctggcgttgaccaacaagagtcccagcgcgaagcg
cgcctcaaagaaactctctcaaacctccagcgcatcttccccggtgtgcgtggtcgcgtg
gtcgacctttgcaagccgacacagcgcaaatacgagactgcggtcgcggtcgtgctgggc
cggaatatcgacgcaatcgtcgtcgacgaggagaagacggcgatagactgcatcgagtac
atgcgcaaccagcgtgcgggacaggcgactttcatcccgctcgatacaattcaggtgaag
cccatcaacgacaagttcagggcgttcgcgaagggagcgcgtttggcggtggacgttatc
acgtatgaccctgcggtggagagggcgatgcaccatgcttgcgggaatgcgctcgtttgt
gattcgatggaggtcgcgaggtatgtttgttacgagaaggggcaggaggtgaaggctgtt
acgctggagggtacaatcatccacaagagcggtctgatcaccggtggaaagagctctcag
acgaatgggaagaagtgggaggagaaggatgtgcagggtctacaacgcgcccgcgacaac
ttcatggctcagttgcttgagcttggcaagtccaagcctcgagggaaggaggctgaagtg
ctactcgcggagattacgcgtctggaatcggcgcggactgttgcgcgcgacgatctgggg
gcctgcagagccaagctcaatggagtcaaggatgagctgaagcacatcgatcgcgagatc
cggcagatccagcccgagttgcgcaaggcacaagctgcgtacgacaagatcaaggagcag
gtagatgcactcgcttcggtcattaacgaggcggaggacggcatcttcgcccacttctgc
gagagaatcggcgtaaacaatatccgcgaatacgaagagcgtcagctcaagctcgcccaa
gctgagagcgaggctcggcttcaattcgatacccaaattgctcgcttgacccacgcgtca
caattcgcagaggaccagctgcggatgactcacgagcgcgtcgcccagtaccaggagatc
ctgaacaccgagggcgggaccctcgcccgacttgaggaagagcgcgctgaggcgcagaac
cagatcgccgaggctgaagaggcgattaggactcttcaggaggagctcaaggagctcacg
gaggagttggaggagaagacgaagcgggtagaggaggtgaagaagacgacgaacagggca
gcgaaggtgctggaccaggccctcaaggagatcgcgacgcataacgacgagatcgagaag
cttggactagagcggtcttcgatctatcgaaaatgcaggctcgacgagatcaagctaccg
ctcgtcgctgggaacttgaagaacgtgccaatggaggaaaatcttcgcgacgaggttgcc
atggatgttgacgaggacgaccagggtacccagcgtgtgaagcgtgttcccgactatggc
atcgaggtcgactttgattccctcagcgacaaggaccgtgaagatgagtcgggtgatgtg
ttgaaggagattgacgacgcgatagccaagaacaacgctgaaattgagcgcatggcaccg
aacatgaaggccatagaaaggctggatgacgtcgaggccaaactgcaggaatcggagaag
gaggctgacaaggcgcgcaaggactccaaaaatgcgcgtgagcaattcaatgaaatcaag
cgcaaacggtgcgaactattcaacaaagcgtacaatcacatctccgagcgcatcgaccag
gtgtacaaggatctcacgaagggcaagatggcaccgacgggtggcgtcgcatacctgacg
cttgaggacagcgaggaaccctacactgccggtatcaagtatcatgccatgcctcccatg
aagcgttttcgagacatggagcagctgtccggcggcgagaagacaattgcagcccttgct
ttgctgttcgctattcacagctaccagccttcaccgttcttcgtgctcgatgaggttgac
gcagcgctcgataacacgaacgtcgccaagatcgcgaactacatccgcgtgcactcgtcg
gacacgttccagtttatcgtcattagcttgaaggggtctttgtacgaacgtagcaactcc
ctagtggggatctaccgggaccaggacgtgaatagctcacgaacgctgaccttggaccta
acacaatatgacgattga
DBGET
integrated database retrieval system