Dichomitus squalens: DICSQDRAFT_79369
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Entry
DICSQDRAFT_79369 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_79369
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_79369
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
DICSQDRAFT_79369
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
DICSQDRAFT_79369
SLIK complex
DICSQDRAFT_79369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Cdh1_DBD_1
CDH1_2_SANT_HL1
DEAD
SWI2_SNF2
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
18844275
NCBI-ProteinID:
XP_007361961
JGI:
79369
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MLNGHDDDPMASGALSPAPLSNSDDSDNTMQVDSDVDVTRNPDADADGEYDEEEADSVPH
ASGAPSSYHSKRVVRDEDESGYEDEPEEPNDDDEDASYADEEYGVPKKKPPKKKKGASKP
KVIPRQAVPDSDSDSDYGARSKKKKKTRNAGDELRVSSRGVRIPNYVDDVQDFEQFDDEA
DAVTYTETAAPMKEEDEIENVLGHCRDEGHENDPEDDWYTNIRFHIKWKNFSHLHNTDEV
YEFLKRFKGLKRVDNYIKAFKMDQEILAARNLSPEERETILLRRERDKEELELHKTVERV
IAQRENETGQVEYFCKWNGLNYDHCTWEVQDDIRPIAKEQIDAFRQREAEAKFPFKSAVY
PRYSRPPFEKIKEDPSYLTDTGGELKDFQLTGLNWLAYLWSKGENGILADEMGLGKTVQS
VSFLSYLFHERRQYGPFLVIVPLSTITAWQSQFATWAPDLHVVTYIGSAAARAVARKYEF
GPSSKKLKMNVLLTTYEITLRDVKELGEIKWQMLMVDEAHRLKNSESQLYEALRGFSAAS
KVLITGTPLQNNVKELLSLMHFLMPEKFLLTNEFDLTDADHEVKIKELHKQLESLMLRRL
KRDVLTSLPTKSERILRVEMSAMQTHFYKNILTKNFQALVKSANGNNNISLLNIAMELKK
AANHPFLFEGAETRSNNDEEVLKGLVMSSGKMVLLDKLLHRLRADNHRVLIFSQMVRMLD
IMSDYMTLRGYQHQRLDGTVASEQRKKSIQHFNAPGSPDFAFLLSTRAGGLGINLETADT
VIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDILERAKKKMVLEYAIIN
QMDTSQAHLSSKGGGSKDPSKADTLSKDELHAVLKYGAQKIFDKDDSQQNKKLDEMDLDD
ILNRAEQHETVAAQNEGASLGGEGFLEQFANIADVKNDMNWEDIIPVEERQRFERDEDQR
KAEEIAAAETKDRKRSHAPVSYEGMDVEHTSSAPPAKKPRHPAPQRKTPSQKAMELKERD
VRVLVRSLQKWGDIRQRYDTIVTEAKLTEKNRGMIQDVADDIIELCARAVEENNNEKRAR
LEAGETLTNAQKSKAVLVTYRNVNNINAETVLSRHRDLQILFKYLDPLSEDERYDWTIPI
ENIRPTLNWSGRWGPQEDAMLLVGAYKYGFGNWEAMAKDPRLGLEGKFFLEEGKKGEDAA
SKPIPNAIHLVRRGDYLLGILREHDEKIRAIESTLTRRGQKVSMSPPPPVASTSYAATVR
KRAESEAVASVDEGANKKRKRRPTPTFTDSSSSDECPSMDEAATKEELRPVKKQLKNLKL
SGGDMPREDKVAILKESLAAIGKRIEVVLQAKAAAGEDRDRWRRHLWTFVTLFWPKKVKA
GKLEEIHAKMVMKEGAPRASSSDGTSAAKKPRLSVGASSRAGGPAAPSASTSSSHTNGKY
R
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacggccacgacgacgaccccatggcgtcgggcgccctctcccccgccccgctc
agcaatagcgatgatagcgacaacacgatgcaggtcgactcggatgtcgatgtgacccgc
aatcctgacgccgacgcggacggcgagtacgacgaggaggaggctgatagtgttccccac
gccagtggcgccccctcctcctaccattccaagcgcgtggtgagggatgaggacgagtcg
gggtacgaagacgaaccagaagagccgaacgatgacgacgaagatgcctcgtatgcagac
gaggaatatggtgtgccgaagaagaaaccaccaaagaagaagaaaggagcttcgaagccc
aaagtcattcctcgacaagccgtccccgactctgactccgattccgactacggcgcgcgc
tcgaagaaaaagaagaagacgcgaaacgcgggcgatgaacttcgcgtctcgagtcgagga
gtgaggatccccaactacgtcgacgatgtgcaagatttcgagcagtttgacgacgaagcg
gatgccgttacgtacacagaaaccgccgctccaatgaaggaagaggacgaaatagaaaac
gtactcggacactgtagggatgagggacacgagaacgacccggaggatgactggtacacg
aatattcgtttccacatcaaatggaagaacttctcccacctgcacaatacggacgaagtg
tatgagttcctgaagcgattcaagggcctcaaacgcgtcgacaactacatcaaggcattc
aagatggaccaggaaatccttgccgccaggaacctatcgccagaagagagggaaactatc
ctgctccgacgagaacgcgataaggaggagcttgaactgcacaagacggtcgaacgcgtc
atcgcacagcgcgagaacgagacagggcaggtcgaatacttctgcaagtggaacggactg
aattacgatcactgcacatgggaagtccaggatgacatccgacctatcgcgaaggagcag
atcgacgcgttccgacagcgggaagcggaagccaaattcccgttcaagagtgcagtgtac
ccgcgatactctcgcccgccgttcgagaagatcaaagaggacccgtcgtatcttaccgac
accggtggtgaactcaaagacttccagctcactggcttgaactggctagcgtatctatgg
agcaagggcgagaacggcatccttgcggacgagatgggtttggggaagactgtccagtct
gtttctttcctgtcatatctgttccatgaacggcgacagtatggtccgttcctcgtgatc
gtccctctgtctacgatcaccgcctggcagtcgcaattcgcgacatgggcgccagatctg
catgtggtcacatatatcggcagcgccgccgctcgtgcggtcgcacgcaaatacgagttt
gggccatcctccaagaagctcaagatgaacgtcttgctgaccacctacgagatcacgctc
cgggacgtgaaggagttaggcgagatcaagtggcagatgctcatggtggatgaggcacat
cgcctcaagaactcggaaagtcagctttatgaggctctccgtgggttctcggctgcatcc
aaggtgctcattacaggaacaccgctccagaacaacgtcaaggaacttctctcattaatg
cattttctcatgccggagaagttcctactaacgaacgagttcgacctcacggacgcggat
catgaagtgaagatcaaggagttgcacaagcagctcgagtcccttatgctgcgtcgtctg
aagcgcgacgtcttgacctcgctaccgaccaagagcgagcggattcttcgcgtggaaatg
agtgccatgcagactcatttctacaagaacattctcacgaagaacttccaagccctggtc
aagagcgccaatggcaacaacaacatcagtttgttgaacatcgccatggagctgaagaag
gccgcgaaccaccctttcctctttgagggggcggagacacgctccaacaatgacgaggag
gttctcaagggccttgtgatgagcagcggcaagatggtcctcctcgacaagctgcttcac
cgcctacgcgccgataatcaccgcgtcctcatcttcagtcagatggtccggatgctcgat
atcatgagcgactacatgacgttgcgcggctatcagcaccaacgcctcgacgggaccgtc
gcatcggagcagcggaagaaatcgattcagcacttcaatgcgcccgggtcgcccgacttc
gcgttccttctctccacgcgtgccggtgggttgggtatcaacctcgagaccgccgatacg
gtcatcatcttcgacagtgactggaacccccagaacgacctgcaggcgatggcacgtgca
caccgtattggccagaagtcgcatgtcagcgtctaccggtttgtgagcaaggacactatg
gaggaggacattctagagcgggcgaagaagaaaatggtcctcgagtatgccatcatcaac
cagatggacacgtcgcaggcgcacctcagctcgaaggggggtggctctaaggacccctcg
aaagccgatacgttgagcaaggacgagctccacgcggtcctcaaatacggggcgcagaag
atcttcgacaaggatgacagccagcagaacaagaaacttgacgagatggacctcgacgat
atcctcaatcgtgctgagcagcacgagacggtcgcagcccagaacgagggcgcgtcgctc
ggcggcgagggctttctcgagcaattcgccaatatagccgacgtcaagaacgacatgaac
tgggaggacattattcccgtcgaagagcgtcaacggtttgagcgcgatgaggatcagcgc
aaggccgaggagattgctgcggcggagacaaaggacaggaaacggtcccacgcacccgtg
tcctatgaaggtatggacgtcgagcacacctcctcggcaccccccgcgaagaagcctcgt
catcctgcacctcaacggaagacacctagccagaaggctatggagctcaaggagcgcgac
gttcgtgtactcgttcggagcttgcagaagtggggtgacatcaggcaacgatatgacacc
atcgttaccgaggccaagctcaccgagaagaaccgtggcatgatccaggatgtcgcggac
gacatcattgaactctgtgcccgcgccgtcgaggagaacaataacgagaagcgggcacgt
ctcgaggccggcgagaccctcaccaacgcgcagaagagcaaggccgtcctcgtcacgtat
aggaacgtcaataacatcaacgctgagactgtcctctcaaggcatcgtgacctgcagatc
ctcttcaagtacctcgatccactcagcgaagacgagcggtacgactggacgattcctatc
gagaacatccgtccgacgctcaattggtcaggacgttggggtcctcaggaagacgcgatg
ctccttgtcggcgcgtacaagtatgggttcggcaattgggaagccatggccaaggatcct
cgtctaggtcttgagggcaagttcttccttgaggagggaaagaaaggtgaggacgcggcg
agcaaacccatccccaatgctatccacctcgtccggagaggagactatctgctgggcatc
cttcgagagcacgacgagaagattcgtgcgatcgagtccacgctcactaggcgaggccag
aaggtgtcaatgtcgccaccgccgcctgtcgcgtcaacgtcgtacgcggccaccgtcagg
aagcgggcggagagtgaggctgtggcctcagtggatgagggtgcgaacaagaagcggaag
cggagaccaacacccaccttcaccgactcttcttcgtccgacgagtgcccatcgatggat
gaggcggctacgaaggaggagttgcggcctgtcaagaagcagctgaaaaacctcaagctc
tctggtggtgacatgcctcgggaagacaaggttgcgattctcaaggaatcgttggctgct
atcggaaaacgcatagaggttgtattgcaggcgaaggcggctgcgggcgaggatcgcgac
agatggcgacgacacctctggacattcgtgacgctcttctggcccaagaaagtcaaagcg
gggaagctcgaggaaatccatgcgaagatggtcatgaaggagggcgcaccgagggcttcc
tccagtgatggcacctcggcggcgaagaagcccaggctaagcgtgggtgcatccagtcga
gcaggtgggcccgccgctccatccgcgtccacgagttcttcgcatacaaacgggaagtac
cggtga
DBGET
integrated database retrieval system