KEGG   Dichomitus squalens: DICSQDRAFT_82849
Entry
DICSQDRAFT_82849  CDS       T03133                                 
Name
(RefSeq) PIN domain-like protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
dsq  Dichomitus squalens
Pathway
dsq03030  DNA replication
dsq03410  Base excision repair
dsq03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DICSQDRAFT_82849
   03410 Base excision repair
    DICSQDRAFT_82849
   03450 Non-homologous end-joining
    DICSQDRAFT_82849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsq03032]
    DICSQDRAFT_82849
   03400 DNA repair and recombination proteins [BR:dsq03400]
    DICSQDRAFT_82849
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dsq04147]
    DICSQDRAFT_82849
DNA replication proteins [BR:dsq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DICSQDRAFT_82849
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DICSQDRAFT_82849
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DICSQDRAFT_82849
Exosome [BR:dsq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DICSQDRAFT_82849
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 18844473
NCBI-ProteinID: XP_007363873
JGI: 82849
LinkDB
Position
Unknown
AA seq 429 aa
MGIKGLTALLAEHAPKSFQASHDLCCRCRRADPCCPQEHEIKTLFGRKVAIDASMSIYQF
LIAVRQKDGELLTNDAGETTSHLMGFFYRTIRMVENGIKPAYVFDGKPPELKSGVLSKRF
EKREEAKEDGEEAKETGTAEDVDRFSRRTVKVTREHNEECRKLLTLMGIPFVVAPSEAEA
QCAELARGGKVYAAGSEDMDTLTFGAPILLRHLTFSEARKTPISEISLEKALEGLEMDMS
QFTELCILLGCDYLEPIKGVGPKGALKLLREHGTLGKVVAHLREKAAEKEDAGEDGGKKK
KGGVQIPDEWPWEAAKALFSKPDVTPADELELEWKSPDIEGLVDFLVKEKGFNEERVRKG
GEKLAKHLNAKQQGRLDGFFTAKPKASPTKKEKEKPAEKGKGTKGTKRKADGKEDKKAAA
GSSKKPRKK
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgggtatcaagggtctcaccgccctcctcgcggagcacgcccccaagtccttccaggcg
agccacgatctctgctgtcgctgtcggcgcgctgacccctgctgcccacaggaacatgaa
atcaagacgctcttcggacgcaaagtcgcgatagacgcgtccatgtccatataccagttc
ctcatcgctgtccgacagaaggacggcgagctgctgaccaacgacgccggagagacgact
agccaccttatgggcttcttctaccgcacgatccgcatggtcgagaacggcatcaagccc
gcgtacgtcttcgacggcaagcctccagagctcaagtctggcgtgctctcgaagcggttc
gagaagcgggaagaggccaaggaagacggcgaggaggccaaggagaccggcacggccgag
gacgtcgaccggttctcgcgccggacggtcaaggtgacccgggagcacaacgaggagtgc
aggaagctgctcacgctgatgggcatccccttcgtcgtcgccccctccgaggccgaggcg
caatgcgcggagctcgcgcgcggcggcaaagtctacgcggcgggctcggaggacatggac
acgctcacgttcggcgcgcccatcctcctccgccacctcacgttctccgaggcacgcaag
acgccgatctcagagatcagcctggagaaagccctggaaggtctggagatggacatgtcg
cagttcacggagctgtgcatcctgctcgggtgcgactacctggagccgatcaagggcgtc
ggcccgaagggcgcgctgaagctgctgcgggagcacgggacgctgggcaaggtggtcgcg
cacttgcgagagaaagcggcggagaaggaggatgcgggcgaggacggcgggaagaagaag
aagggcggcgtccagatccccgacgagtggccctgggaggcggccaaggcgctgttcagc
aagcccgacgtgacgcccgcggacgagctcgagctggagtggaagagccccgacatcgag
ggcctggtcgacttcctcgtgaaggagaagggcttcaacgaggagcgcgtgaggaaggga
ggcgagaagctcgcgaaacacctcaatgcgaagcagcaaggccgcttggatgggttcttc
actgctaagccaaaggcgtcgccgacaaagaaggagaaggaaaagcccgcggagaagggt
aagggcacgaagggcacgaagcggaaggccgacgggaaggaggacaagaaggcggcggca
gggagcagcaagaagcccaggaaaaagtag

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