Dichomitus squalens: DICSQDRAFT_83832
Help
Entry
DICSQDRAFT_83832 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_83832
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
DICSQDRAFT_83832
microRNA pathway
RISC loading complex
DICSQDRAFT_83832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DSRM_2
DUF928
NRIP1_repr_2
Motif
Other DBs
NCBI-GeneID:
18844531
NCBI-ProteinID:
XP_007364350
JGI:
83832
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MLVISDAQRVVPMVMPHPVLRMMSDFHAKTADPPRVFALFTCSPERWVSLDLAWLEAPLR
AQAFFLATKTVNSWSGPVELVMEYEATPSSQMEPYMSSIVRRADPEGLLVRPQHYRRARR
ICLQLGSFATNAWWRDTLDELVALPVSNDTKLSVARDSLELIKSHGMADRLQVAPGSSNP
NVTFKVSKLLQVLQPYAAYGDQFRGIVFVRDKVVASVLPGLLNAAETQVPFIRAIAPSRK
ERSGKNSLHAALSAFSSSKYNLIVLTKSMEDVELPPASIIVNFDVFDDQLSYAYSHLHTR
GRHSHLVYLVEKGNNEQRRILTRVQSVDNEMKEWVGDFVRGDCNAPPKSMHVGLDPYQSD
SDNEGEDYIVDAVTSARIDKSQAIPTFYRFAIQMHAVSGAEDEKVAFNMETGERGDDAAV
LRYIISFPKSTALAAISGPYCSTKWEAKREACHQACKELVRVGIMDHRHFPQSRRVPAGQ
SGSTDTNGETPAPRDVKTANTSAKTHGYPRKIPDFWPNTQSSPPTILYPTVVAPDNMGEE
VHAPVLLLTRAPLPHVPDFSLFFSGLRTTVRFYKAAPITITDAQLKALHGYTLRVTKSLT
NKPLDCPLGDLLCYFAPLDSSWHSSISPHWPLLSVEGHVLWDAVQLAADYFAIRLLDSNV
PIDERAKDAIVLDRQVEFTMRHFVIKVRHDLTPLCKADDSPREAGYQNFLEYCKARCKDF
QGLEDENQPLIEVSAVPGVINNLHPTSAPPTPPAKAPLKYLIPEMCYKFTIPASTFRTLW
LMPSIMNKIESYLLVKELNARLFHNAVIEQQLLIALSTPAAWTEFNYERLEFLGDSFLKV
VASNFCYATMPSVHVGDLHQARQSIISNKVLQEGATRVGVPSYVQHKRFVAKLWQPPLST
ANVAEELKTEGGNGDVEMTGEAPEKKDKGKRSKKQRQLDEQNTLWMGDKIIADVVEAILA
ASFLSGGHEVALEAARRLQVPIPNVAQWSDYARLAAHHAAREQTVVMASAPSRMTISVLE
KLFNSKFNRLDLLGQALTHTSAFSGAEGTSYDRLEFIGDAILDFLVSRYIWERHPYLSPG
GLTMLKANGAMVSNQTLAAFCVHVGLQQYLRMESKDLSTAIQKYIDFLEELRKKEYDFAS
REQRLPGQYWLDMPMEPPKCLSDVVESLIGALYVSDNFFEVGVGRFFETVFKPFLEAHVR
LQTLSTNPKITLLELLQAEGCQNNAVVKQQQSRQNMPVQMDVVIHGKVIASATDSSAVIA
TRKVSLTALDTLANDPELLARMCDCRSTTSNSSKVNPPKPQPTTSEVSVDEEAEAAEVEA
AMGADEEEAE
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcattagcgatgcccaacgtgtagtgcccatggttatgccccacccagtactc
cgtatgatgtcggacttccacgccaagacagccgaccctcctagagtgtttgccttgttc
acctgttcgcccgaacgctgggtttctctggatctggcatggcttgaagcccctctgcgg
gctcaggcgttcttcttggcgacaaagactgtcaactcttggtctgggcccgtggaactt
gtaatggagtatgaagcaaccccgtcctctcagatggaaccttacatgtccagtatcgtg
cgacgagctgatcccgaaggcctgcttgtgcgacctcagcactaccgtcgagcccgacgt
atctgtttacaactgggatcctttgctacgaatgcatggtggcgcgatactttggatgag
ctcgtggcattgccagtgtcaaatgataccaaattgtcagtagctcgagacagtctggag
ctgatcaagagccacggaatggcggacagactgcaagtcgctcctggctcttcgaatccc
aatgtgaccttcaaggtctcgaagctgctccaagtgctgcagccttatgcagcctacggc
gaccagttccgaggcattgtgttcgtgcgagataaggttgtcgcaagcgtcttgcctgga
ctgttgaatgccgccgaaacacaagtaccctttatccgtgctatcgcacccagccgaaaa
gaaaggtcggggaaaaattctttgcacgctgctttgagcgcgttctcttcgagtaaatat
aacctgatagtgcttaccaagtccatggaggacgtcgaattaccaccagcgtccatcatt
gtcaactttgatgtgttcgatgaccagctctcgtacgcatacagtcacttgcatacccgc
ggacggcattcccatctcgtgtatttggtcgagaaagggaataacgaacaacgacgaata
ctcacccgcgtgcagagcgtcgacaacgagatgaaggaatgggtaggcgacttcgtccgt
ggtgactgcaatgccccacccaagtctatgcacgttggtctggacccgtatcagtcggat
agcgataacgaaggggaggactacatcgtggatgctgtgactagcgcacggatcgacaag
tcgcaggcaatccctactttctaccgctttgccatccaaatgcatgccgtgtcaggcgcc
gaagacgagaaggtcgcattcaacatggagacgggggaacgtggcgatgacgcagctgtc
ctccggtatatcatctcattcccaaagtctacagcactcgcagcaatctcaggaccatat
tgttccacgaaatgggaagccaaacgggaggcttgtcatcaagcatgcaaggagctcgtt
cgagttggtataatggatcaccggcacttcccccagtcacgacgagtgccagcaggccag
agcggttctacagataccaacggcgagacccctgctccgcgggatgtgaaaacggccaac
acatccgcgaagactcacgggtatccgcggaaaattcccgacttctggcccaatacgcag
tcgtctccccctaccattctctatcctaccgtcgtcgctcctgacaacatgggtgaggaa
gtccatgcgcctgtcctcctcctgacaagggcccctcttcctcatgtgccggacttttcc
ctcttcttttcgggtttgcgtaccacggtacgattctacaaggccgctcccatcacaatt
accgacgcccagctcaaggcgctccatgggtacactctccgtgtcacgaagtccttgacg
aacaaaccgctggattgccctcttggcgacttgctatgttactttgcccctctggattcc
tcctggcactctagcatctctccgcactggccccttctgtctgtagagggacatgtcctg
tgggacgctgtgcaactcgctgctgattacttcgcgatacgcctgcttgacagcaacgtc
ccaatagatgagcgggcaaaggacgccatcgtgctggaccgccaggtcgagtttaccatg
cggcacttcgtgatcaaagtcaggcatgacctaacgcctctctgcaaagccgacgacagt
ccgcgcgaagcgggataccagaatttcttggagtattgcaaggcacgctgcaaggacttc
cagggactcgaggacgagaaccagcccctgattgaagtcagcgctgtgccaggagtaatc
aacaatctgcatccaacctctgcgccgccgacgcctccagcaaaagcacccctgaagtac
ttgatcccggagatgtgctacaagttcaccataccggcaagcacattccggaccctgtgg
cttatgccctccatcatgaacaagatcgagagctacctgctcgtcaaggaacttaatgca
aggctattccacaatgctgtcatagagcagcaacttctcatcgcgctttctacccctgcc
gcctggaccgagtttaactacgaacgtctggagttcctgggtgactcgtttctcaaggtc
gtcgcttcgaacttttgctacgcaacgatgccctccgttcatgttggtgatctccaccaa
gcgcgacaatctatcatcagcaataaggtcctccaggaaggggcaacgcgcgttggggtg
ccgtcatatgttcagcacaaacgcttcgtcgcgaagttatggcagcctccactaagcacg
gctaacgtcgcagaagaactgaagaccgaaggcggcaacggggacgtggagatgacagga
gaagcccccgagaagaaggataagggcaagcggagcaagaagcagcgacagctcgacgag
cagaacacgctctggatgggcgacaagataattgcggacgtcgttgaagccattctcgct
gcatccttcctctctggcggacacgaagtagcactggaagccgcgaggcgcctccaggtc
cccattcccaacgtcgcacaatggtcagactacgcccgtctcgcagctcatcatgctgcc
cgcgagcagacggtagtgatggcctctgcgccatcacgtatgacgataagcgtgctcgaa
aaattgttcaattcgaagttcaaccggctagacctcctcggacaagccctgacgcatacc
tctgccttctcgggcgccgaaggaacgagttacgatcgcttggagttcatcggtgacgcc
attctcgacttcttggtatcgcgttacatctgggaacgccatccgtacctctcccctggc
ggcctgacgatgttgaaggcaaatggtgctatggtgtcaaatcaaacgttggccgctttc
tgcgtgcacgtcggtctgcagcaatacttgcgcatggaatcgaaagacctcagcaccgcg
atccagaaatacatcgacttcctagaggagcttcgcaagaaagagtatgacttcgcgagc
agggagcaacgattgccaggtcaatactggcttgacatgcccatggaaccaccgaagtgc
ctatctgacgtcgttgagtccctcataggggctctctacgtctccgacaacttctttgag
gtcggggtcggacgcttctttgagaccgtcttcaagccattcctcgaggcgcacgtccga
ctgcaaacactctcgaccaatccaaaaataaccctgctggagctgttgcaagcggaaggg
tgccagaataacgctgtggtgaaacagcagcagtcgcgccagaacatgcccgtacagatg
gatgtcgtcattcacgggaaggtcatagcaagtgcgacggactcatctgctgtgattgcg
acgcgcaaggtgtcactcactgccctggacacgttggcgaacgacccggagctcctggcg
cgtatgtgcgattgcagatctaccacgtccaactccagcaaggtgaacccgccgaagcca
caaccaaccacgagcgaagtctcagtagacgaagaagcggaagcggcggaggttgaagca
gccatgggagcggacgaggaagaagcggagtga
DBGET
integrated database retrieval system
