Dichomitus squalens: DICSQDRAFT_85749
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Entry
DICSQDRAFT_85749 CDS
T03133
Name
(RefSeq) WD40 repeat-like protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
dsq
Dichomitus squalens
Pathway
dsq04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DICSQDRAFT_85749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsq04121
]
DICSQDRAFT_85749
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_85749
Ubiquitin system [BR:
dsq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
DICSQDRAFT_85749
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
DICSQDRAFT_85749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_SCAP
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_DCAF4
Beta-prop_EIPR1
ANAPC4_WD40
F-box
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_Nup120_160
WD40_RFWD3
WDR54
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
18844619
NCBI-ProteinID:
XP_007365397
JGI:
85749
UniProt:
R7T062
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MAQPEASSSHIHIPFPTYHDHADDDDDVFGGHASDAHATPRFSHLLNSVLGSPFLTTSDL
PAGDADTAYAPSAMFGADDSNGNAYADDADDVDMETVDGAFASVPRSFTITRPTSPTPSF
RTETFSIVNWNPDAYSTMLPGNGDGTPRCSMAFIHPSGRRTISGYPSYWNPLSNTPAPSP
IKPSRSLTIGMGILPRIWDALREGSPGKRIRRRPGIPSWRDTAELEYHSDGYVDYASLDP
LDGEEGELVDDEACFIDVRAITGMDIVSHLPLELALYLLAFLDLPSILSCLRVSRNWNQL
ARDNSIWRVLFSLREKDGWRVDLRRAPRESMLSSLRMPLSMMPAPLEINWYNLYRNRQEL
DRRWSNYPGAGLSADLSDDSPLKEKETPRGYEPKVTRIGGHGDSVYCLEFDSSRIVTGSR
DRTIKVWSLRTGKCLATFAGHRGSVLCLKFDRDWDTLDDEEIERVDERAPRKGFMVSGSS
DCTVVVWDLYAHPVPGEEPRVTAEVRKVLRAHGGGVLDLRIDSRWIVSCSKDALIRVWDR
KTLELHCTLRGHEGPVNAVGLQGNRVVSASGDGKMILWDVASGERLRTFEGHDRGLACIE
FKDELIVSGSNDCKIKVWDANTGVCLRTLTGHDYLVRALSFDPRSGRLVSGSYDKTVKVW
DLHSGKMVREFRGCHVSHIFDVKFDHCRIVSTSHDRKIVVLDFSEGLDTTLFV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccggaagcgtcctcctcacatatacacatccccttcccgacctatcatgac
catgctgacgatgacgacgatgtgttcggaggccacgcctcggacgcgcatgccactccg
cgcttcagccatctcctaaattccgtccttggctctccatttctgaccacctcagacctt
cctgccggcgacgcggacaccgcatatgccccaagcgccatgttcggcgcagatgacagc
aacggaaatgcatacgcagacgacgcagacgatgtggacatggagaccgtcgacggcgcg
ttcgcttccgtcccgcgttcttttactatcacccgccccacctcccctaccccaagcttc
cgcacggagacgttctccattgtgaattggaatcccgacgcatacagtacaatgcttcct
ggcaatggtgatggcacgccgcgctgctcgatggcgttcattcacccctcagggcggcgc
acaatctctgggtacccaagctactggaatcccctctcaaacaccccagcgccttcgccc
atcaagccttctagaagcttgacaatcggtatggggatcttgcccaggatatgggacgcg
ttgcgggagggttccccgggtaagcgcatacggcgacggcctggcattccgtcatggcga
gatacagcggagctcgagtaccattccgacgggtacgtcgactatgccagtttggatcct
ctggatggcgaagagggggagcttgtcgacgacgaagcgtgtttcatcgacgttcgcgcg
atcaccggcatggatatcgtgtcgcacttgccactcgagctcgcactctatctactggcg
ttcttggatctaccctctatcctatcttgccttcgtgtatccaggaattggaatcaattg
gcacgcgacaactcgatatggcgtgttctcttctccctgagggagaaggatggttggcgt
gtcgacctacgtagagcaccccgcgagagcatgctgtcatcgctgaggatgcctctttcc
atgatgcccgcgccccttgagatcaactggtacaacctataccggaatcgacaggagctc
gaccgccgctggtccaattaccctggtgctggactgagtgcggatctgagcgacgatagt
cccttaaaagagaaggaaaccccaagggggtacgagcccaaagtgacgcgcatcggtgga
cacggcgatagcgtatattgtctagagttcgattcgtcacgcatcgtcactggatcgcgc
gaccggacaatcaaagtctggagcctcaggacgggcaaatgcctcgcgacgttcgctggc
caccgcggctcagtcctctgcctgaagttcgaccgtgactgggataccctggacgacgag
gagatagaacgtgtcgacgagcgtgcgccgcgcaaggggttcatggtcagcggttcgagc
gattgcacggtcgtcgtgtgggacttgtatgcgcacccagttcccggagaggagccgagg
gtcacggcggaagtcaggaaggtgcttcgtgcgcatgggggaggggtgctagatcttaga
attgactcgaggtggatcgtcagttgctcgaaggacgctttgatccgggtgtgggacagg
aagaccctggagttacactgcacactacgcggtcacgagggccctgtgaacgcggtcggg
ttacagggcaacagggtggtcagcgcaagcggagacggaaagatgatcctgtgggatgtt
gcgagtggggaacggttgaggacgttcgaaggccatgaccgtggtctggcatgcatcgag
ttcaaggacgaactcatcgtatctggctcgaacgactgcaagatcaaagtttgggacgcg
aacacgggtgtgtgccttcgcacgctgactgggcacgactacctcgttcgtgcactgtcc
ttcgatccccggagcggacgactcgtgagcgggagctacgacaagacggtcaaagtgtgg
gacctgcactcgggcaagatggtgcgggagttccgcgggtgccacgtgagccacatattc
gacgtcaagttcgaccactgtcgtatcgtaagcacttcacatgacaggaagattgttgta
ctcgatttttctgaggggttggacacgacgttgtttgtctga
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integrated database retrieval system