Dichomitus squalens: DICSQDRAFT_87772
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Entry
DICSQDRAFT_87772 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsq04131
]
DICSQDRAFT_87772
Membrane trafficking [BR:
dsq04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
DICSQDRAFT_87772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
zf-RING_16
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
PHD
WD40_MABP1-WDR62_2nd
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
18844729
NCBI-ProteinID:
XP_007366725
JGI:
87772
UniProt:
R7SWX0
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MSGSGNLPSSDHKSVTGRGGHRIEASRNLWEGSGLKVDSSSTDVAWCHGAFNNKILTSAR
NGELIMWDLNKNGSSKYERRVRDHARSIHVLQYSPILQSYCMTGSADGDIRIWDVRDLTK
SIMRIHHPAAVRAVAFSPVSSQSRHVVTALDNGSMYRWDLTMGQRGQLDRLPVAHSGPVL
SLDWVPPSTLSAPTASSTRQAGASNWYGGPGAGFFEDILPSVPIASGNAPSPDTDTSSGP
GWVVSGGMDRTVKVWDLSRPPPTTRSHQPYYPAYTLHTSFPVRRVLFRPGYECELAVVSN
ADFGTGTDFGHGALGGGPSSASAGMPSPRVPSALLGGMGLAGGSGSKSDGTTTPEGRAKS
QGPGEGSGSDPVEIWDVRRGYVAKWVVSGSAIESGVTDIDFADSHALWALHQSGTFSQLD
LRQSKRPLDAIPRTAVSWNTSGSIAFVTDRPKRWEVPYDDVDPESKDERVPLKALGDPPY
RPSTQNVGAYAPDGAAEDLDMIEKLARGYIYADKSKADICSHNAEVAIDAGAHDAAQTWL
LLASLLTDIVTPPTPPLSPLQRASPQLPHSASAPAAIPTVSSLTQPPQTPLSGHPVRSAT
ADATGLAQAKERSPGSLSKYADDRHRRSTSSHRSDRGITPTSSNASSPRKPSTGLPSVPA
AVFARRGSGAGLPPPLRPRLSSSVRRPSFSTQSILSAQSESPSDSMRSHTSLSLRHVGEG
ALDDSDSDDSGSEHGCDGPERDEDDYHAQHPRAPSRGATSPYAHRGNSSTTTAHPSPLSR
LALTSQQGLTEDEKDDEDSPSPGSTSGSDDDGEGYGGEDESDDARMGDDDDEERGGNGGG
AGRRIASRLSGGHRRRRSSATQSRTRSRSSTVASLVAPAPTLSRRLTKQESQSSIRTVIA
GETTPAGTLSRADGLAIQSGGLRRDDTIRDIAGARAASVRGSMHQRATSEAMSSDLALNE
REVVGMDGSRSRSVAISVARTQSDRARTAVREAEERLRRLAWATMRERFEQYSDEGDIIM
CAMLSLVLQKELKIAKTRRARFVEAYIDILSRLRLHTCAAYIRKFVDAEQIRVVTAMATT
IYSTCGKCRKPMIAPAAPMVHAGRPSGSYAYCMQCRTNVTKCTICHLPVRSLMIQCPVCM
HGGHQDCYQEYYLRRPPDEITPPPLPPSMRMGRSPETGHSRGRALSRTNSTYTGDGESDD
GASAQGDGNGTAGSWESGKDVVVSSSNAVLGRTCAAGCGHYCWAVNDKGYPT
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtccggctcagggaacctaccgtccagtgaccacaagtccgttacgggaaggggtggc
catcggattgaagcttcgcgcaacctctgggaggggagcggcttgaaggtcgacagctcg
agcaccgacgtcgcatggtgccatggagcgttcaataacaagatactgaccagcgcgcgg
aatggcgaactgatcatgtgggacttgaacaagaatggctcgtcgaagtatgagcggcgc
gtccgcgatcatgcacggtctatccatgtcctgcagtattctccgatcctgcaaagctac
tgcatgaccgggtccgccgacggcgatattcggatatgggatgtccgagatctcaccaag
tcgattatgcgaatacaccatcccgccgctgtccgagccgtagcgttttcccccgtctcc
tctcaatcccgtcacgtcgtcacagcactcgacaacggcagcatgtacagatgggatctc
actatgggccagcgcggccagctcgaccgtctccccgtcgcccactccgggcccgttctc
tcgctcgactgggtaccaccctcgactctctcggcgccaactgcgtcttccacccgtcaa
gcgggcgcgagcaactggtacgggggcccaggggctggtttcttcgaggatatcctcccc
tccgtgcccatcgccagcgggaacgcgccctccccggacacggacacgtcgagcgggccg
gggtgggtggtcagcgggggcatggaccgcacggtcaaagtctgggacttgtcgcgcccg
ccaccgacgacgcggtcccaccaaccgtactacccggcctacacgcttcatacctcgttc
cccgtccgccgcgtgctcttccgcccggggtacgagtgcgagctcgcagtcgtgtcgaac
gccgacttcggcaccggcacggactttgggcatggcgctttggggggcgggccatcaagc
gcgagtgcggggatgccgagtccgcgtgtcccgtctgcgcttcttggagggatggggctc
gcgggtgggagtggcagcaagagcgatgggacgacaaccccggaggggagggccaagtca
caggggccgggtgagggcagcgggagcgacccggtggagatatgggacgtgcggaggggg
tacgtcgccaagtgggtcgtgagcgggtcggcaatcgagagcggggtaacggacatcgac
ttcgcggactcgcacgcgctgtgggcgctgcaccagtccgggacgttctcccagctcgac
ctgcggcagtccaagcggccgctcgacgccatcccgcgcaccgcggtgtcgtggaacacc
tcgggctccatcgcgttcgtgactgaccgcccgaagagatgggaggttccgtacgatgat
gtcgatccggagagcaaggatgagagggttccgttgaaggctctaggcgacccaccgtac
cgacctagcactcagaatgtgggtgcctatgcacccgacggcgctgcagaggacttggac
atgatcgagaagctcgcgaggggatatatctatgctgacaagagcaaagcggatatttgc
agccacaacgccgaggtcgctattgatgcaggggcccatgatgcggcgcaaacgtggctg
ctgctcgcatccttgcttacagatatcgtcactccgccgacgccccctctttccccattg
cagagagcaagcccacagttaccgcattctgcatctgctcctgctgccatccccacagta
tcgtccctcacccagccgccacagaccccattatccggacatccagtacggtcggctacg
gcggacgcgacaggtctcgcccaggcgaaggagagaagtcccgggtcactatccaaatat
gctgacgacagacatcgacgctcgacgtccagtcacagatcagatcgtggtatcacgccc
acatcctccaacgcctcctcgccgcgcaaaccgagcaccggccttccgagcgtgccggca
gccgtgttcgcgcgtcgggggtccggcgcgggtctcccgcctccgctccgcccgcgcctc
tcctcgtcggtccgccgtccgtcgttctccacgcagagcattctgagcgcgcagagcgag
agcccgagcgacagtatgcgcagccacacgagcttgagcctgagacacgtcggcgaaggc
gcgctggacgactcggattcggatgactcaggcagtgaacacgggtgcgatggccccgag
cgtgacgaggatgattatcatgcccagcaccctcgtgcgccctcgaggggcgctacctcg
ccatatgcacacaggggcaatagcagcacgacgacggcgcacccgtcgccgctgtcacgg
ctcgcgctgacaagtcagcagggcttgacggaggacgagaaggacgatgaggactcgcct
tctccggggtctacgtccggatcggacgacgatggagaagggtacgggggcgaggacgag
agtgacgacgcgcggatgggtgatgacgacgatgaggaacggggagggaatgggggcggc
gcaggaaggagaatcgcgtctcgtttgtctgggggacaccggcggcgacgcagctcggcg
acgcagagcagaacgaggagccggagctcgaccgttgcgtcgctcgttgctccagcgccc
acgctgtcgaggagactgacgaagcaggagagccagagtagtatacgcacggtcatcgcg
ggagagacgacacccgcggggacgttgagccgggcagacggcctggcgatccagtctgga
ggtctgaggagggacgacacgatcagggatatagctggggcacgggcggcttcggttcgg
gggtcgatgcaccagcgggccacgtcggaagcgatgtcaagtgacctcgccttgaacgag
cgcgaggtggtgggaatggatgggagtaggtcacggagtgtggcgatcagcgtagctagg
acgcagagcgaccgagcgagaactgctgtgagggaggcggaggagcggttgaggcggctt
gcgtgggcgaccatgcgggagcggtttgaacagtactctgatgagggtgatatcatcatg
tgtgcaatgttgtcgttggtcttgcagaaggagttgaagatcgcaaagacgaggagagct
cggttcgtcgaggcatacatcgatatcctgagtcgtttgcgcctgcacacgtgcgcggcc
tacatccgcaagttcgtcgatgctgaacagatccgcgtcgtaaccgctatggcgacaacg
atctacagcacttgtggtaagtgccgcaaaccgatgattgcccctgcagctcccatggtg
cacgcgggaagaccatcaggcagttatgcgtattgtatgcaatgccgaaccaatgtcacg
aagtgtactatatgtcatctacctgttcgttccctcatgatccaatgccctgtatgtatg
catggtggccatcaggactgctaccaggagtactacctccgccgaccgccagatgagatc
accccacctccactcccgccgtctatgcgcatgggtaggagtccggagaccggccattct
cgcggtcgcgcgttgtcccgaacaaattcgacgtacacaggagacggggagtcggacgat
ggtgcgagcgctcaaggggatggcaatgggactgctggaagctgggagagtggaaaagat
gtggtggtgtcttcgtcgaatgcggtgctaggccgaacttgtgctgctggatgtggacac
tattgctgggctgtgaatgataagggttatcctacgtaa
DBGET
integrated database retrieval system
