Dichomitus squalens: DICSQDRAFT_93182
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Entry
DICSQDRAFT_93182 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
dsq
Dichomitus squalens
Pathway
dsq00260
Glycine, serine and threonine metabolism
dsq00270
Cysteine and methionine metabolism
dsq00450
Selenocompound metabolism
dsq00670
One carbon pool by folate
dsq01100
Metabolic pathways
dsq01110
Biosynthesis of secondary metabolites
dsq01230
Biosynthesis of amino acids
Module
dsq_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DICSQDRAFT_93182
00270 Cysteine and methionine metabolism
DICSQDRAFT_93182
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DICSQDRAFT_93182
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DICSQDRAFT_93182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsq04147
]
DICSQDRAFT_93182
Enzymes [BR:
dsq01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
DICSQDRAFT_93182
Exosome [BR:
dsq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DICSQDRAFT_93182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Motif
Other DBs
NCBI-GeneID:
18845004
NCBI-ProteinID:
XP_007370503
JGI:
93182
UniProt:
R7SLY7
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MSPAILNGEHAAPNGQSNTNGIHAIKEHASLDGFGTRAIHVGSEPDPSTSAVIPAISLST
TYKQHGVGNHKGFEYSRSGNPNRNALEATLAAIESGGAYALAFASGSSTTATVLQALGPD
AHVVSVNDVYGGTFRYMTRVASENQGLQTTFVDLENASDSEVLASFRPNTKLIWIETPTN
PTLRLVDIARIASLAHSAPSKPLVLVDNTFLSPFYQSPLVLGADIVVHSLTKYVNGHSDV
VMGALILPAHHAALAEKLRFLQNAVGSVPSAYDCWLAQRGVKTLHLRMKAHGANALAVAR
ALQKSPHVEEVIYPGLASHPRNDLAYRSLSSHARAYVDRFLKDHGDAAGGFPYGGMISFR
IRGGAAEAEKFLTSTRLFTLAESLGGVESLAELPAQMTHGSIPPAERALLGIGDNLIRLS
VGVEEEEDLVADVEQALEAAASLSKDL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagccatcttgaacggagagcacgccgcacccaacggccagtcgaacacaaac
ggcattcatgccatcaaggagcacgcctcgctcgacggttttggcacgcgcgccatccac
gtcggctcggagcccgacccatcgacgagcgcggtcatccccgccatctccctgagcacg
acgtacaagcagcacggagtagggaaccacaagggtttcgagtactcgcgctccggcaac
ccgaaccggaacgcgctcgaggcgacgctcgccgcgatagagtccggaggcgcgtacgcg
ctcgcctttgcctccggctcgtcgacgaccgcgaccgtcctccaggcgctcggccctgac
gcgcacgtcgtcagcgtgaacgacgtctacggtgggaccttccgctacatgacgcgcgtc
gcctcggagaatcagggcttgcagaccacgtttgtggacctcgagaacgcgagcgatagc
gaggttctcgcgtccttccgtccaaataccaaactcatctggatcgaaaccccgacgaac
cccacgctccgtctcgtcgacatcgcgcgcatcgcttctctagcgcactccgcgccctcg
aagcccctcgtcctcgtggacaacaccttcctctcccccttctaccagtccccgctcgtc
ctcggcgccgacatcgtcgtgcactctctgacgaagtacgtcaacggccactcggacgtc
gtcatgggcgccctcatcctccccgcgcaccacgccgcgctcgcggagaagctccgtttc
ctccaaaacgccgtcggctccgtgccgagcgcgtacgactgctggctcgcgcagcgcggc
gtcaagacgctccacctgcgcatgaaggcgcacggagccaacgcgctcgccgtcgcgcgc
gcgctccagaagtcgccgcacgtcgaggaggtcatctaccccgggctcgcgagccacccg
cgcaatgacctcgcgtaccgctcgctctcgtcgcatgcgcgcgcgtacgtagaccggttc
ctgaaggatcacggggatgccgcgggcgggttcccatatgggggcatgatctcgttccgc
atccgcggcggggccgctgaggcggagaagttcttgacctctacgcggctgttcacactc
gcggagagcttgggtggcgtggagagcttggcggaactccctgcgcagatgacgcacggg
tctattccgcctgccgagcgtgcgctgctgggcatcggggataacctcatcaggctgtct
gttggcgtggaggaggaagaggatctcgtggctgacgtagagcaggccttggaagcggct
gcttcgctctccaaggacttgtga
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