KEGG   Dichomitus squalens: DICSQDRAFT_93281
Entry
DICSQDRAFT_93281  CDS       T03133                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
dsq  Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dsq03009]
    DICSQDRAFT_93281
   04121 Ubiquitin system [BR:dsq04121]
    DICSQDRAFT_93281
Ribosome biogenesis [BR:dsq03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    DICSQDRAFT_93281
Ubiquitin system [BR:dsq04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     DICSQDRAFT_93281
SSDB
Motif
Pfam: WD40 Sof1 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD40_RFWD3 eIF2A ApbE
Other DBs
NCBI-GeneID: 18845006
NCBI-ProteinID: XP_007370568
JGI: 93281
UniProt: R7SLW9
LinkDB
Position
Unknown
AA seq 455 aa
MVKINVLQHAPSSHLPARPGDPTPTSRNLDPLMHPFARARERTRALNAAKMERMFAKPFV
ASLEGHVDAVETMARKPDTLDIVASGSWDGGLILHDVSRRKRLFQVDNAHKGKVSGVCFG
QQGRLLSCGVDRNIKLWDTEASLDDDDFGAGPSQRKPVSIFPGKFAFNSIDHHRYDPFFA
TASNLVQVWDETKSAAISNLTLPTSTETVTAIRFNLAEASVLASIGSDRSFTLYDIRTGK
AERRIIMQMRSNALSWSPTFPTCVLLASEDHNLYTFDIRSLNTPTQIYKAHVAAVMSCDW
SPTGLEFVSGGWDRTVRIWKEGRGSAPEIYHTKRMQRVMSTLYTGDSRFVLSGSDDGNVR
VWKAHASDKLGIITARERAAIEYRESLKSRWKADSEVSKISRTRHLPKPVHKASQLKRTM
LEAQRVKEERRRKHTRAGEHKPKAERKKVVITEHS
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggttaaaatcaatgtacttcaacatgcgccctcctcacacctacctgcacgacctgga
gatcctactcctacctcccggaacctcgatccactcatgcacccgtttgcccgcgcgagg
gaacggacgagggctcttaatgccgcaaaaatggagcgtatgtttgccaagccgttcgta
gcgagcttggaaggacatgtggatgccgtggagacaatggcgaggaaaccggacacccta
gacatcgtggcaagcgggagctgggacggaggcctcatcctgcacgatgtatcaaggaga
aaacgactgttccaggttgacaatgctcacaaaggcaaagtctccggcgtgtgcttcggg
cagcagggacgactcttgagttgtggagtagaccggaatatcaaactttgggacactgaa
gcaagtcttgatgacgacgatttcggtgccggtccctctcagaggaaacccgtcagcata
tttcctgggaaatttgcattcaactccatagatcatcaccggtatgatccttttttcgca
acagcgtccaaccttgtccaagtatgggacgagacgaagagcgccgcaatatccaaccta
acacttcctacctcgacggaaactgtcacagcaatccgttttaatctagcagaggcgtcg
gtactagctagtataggctctgaccgcagcttcaccctctacgacataagaacggggaaa
gctgaacggcggatcatcatgcaaatgcgcagtaatgcgttgtcatggtccccgactttc
ccgacctgtgtccttctcgcgtcggaggatcacaatctctacacatttgacatccgctct
ttgaacacccctacacagatttataaagcgcacgttgccgcagtcatgtcctgcgactgg
agcccaactggtctagagttcgtcagtggtggttgggatcggacagtccggatatggaag
gaaggacgcggctctgcgcccgagatctaccacacaaaacgcatgcagcgcgtcatgtca
acactatatacaggggactcgcggttcgtcctatcgggctcggacgacggcaacgtccgc
gtctggaaagcgcacgcgtccgacaagctcggcatcatcacagcgcgcgagcgggctgcg
atcgagtaccgcgagagtctcaagtcgcgctggaaggccgactcggaggtcagcaagatc
tcccgcacgcggcacctgccgaagccggtgcacaaggcgtctcagctcaagcggacgatg
ctcgaggcacaacgcgtcaaggaggagcggcgccggaagcacacacgcgcgggcgagcac
aagccgaaggcggagcggaagaaggttgtcatcacggagcactcgtag

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