KEGG   Dichomitus squalens: DICSQDRAFT_94249
Entry
DICSQDRAFT_94249  CDS       T03133                                 
Name
(RefSeq) Cullin-4B
  KO
K10609  cullin 4
Organism
dsq  Dichomitus squalens
Pathway
dsq03420  Nucleotide excision repair
dsq04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    DICSQDRAFT_94249
  09124 Replication and repair
   03420 Nucleotide excision repair
    DICSQDRAFT_94249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dsq04121]
    DICSQDRAFT_94249
   03400 DNA repair and recombination proteins [BR:dsq03400]
    DICSQDRAFT_94249
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dsq04147]
    DICSQDRAFT_94249
Ubiquitin system [BR:dsq04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     DICSQDRAFT_94249
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      DICSQDRAFT_94249
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      DICSQDRAFT_94249
Exosome [BR:dsq04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   DICSQDRAFT_94249
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF515
Other DBs
NCBI-GeneID: 18845068
NCBI-ProteinID: XP_007371330
JGI: 94249
UniProt: R7SJN2
LinkDB
Position
Unknown
AA seq 832 aa
MTDVYSLFTFPTTSRGFSALPSQPQAFPSTKDSSRSASPPRKIARLDGASDAHSASAPSS
RAGVAEPADKRGPIVLRVVGPSIQPTPDGVSNEEYGLVRRTIKILLDPEEKSPLPATYDR
ISRACRAVVNEAGRGEGLYDFLKMELERRVSKMEEKLGGEPRKSVDWLVPFTETCEWFEK
QVGLLQSLLAYLDTLYVAERGHLIGTKQLAYTMFTNTVVKSVRVTAAIMDGIADWLEWER
THKATHPLRSYLPKLVRHMRAHDLYVEIIETPYLNLTHTYYIKESNDLADGNKLKADEFL
EHVKRRSAEERTRADEVLIESSVKSIHDTTDNALLAGRLQWLANDALDTLIKGRNDSQIK
SMYELFAKVGGLKVLSAAFKVHVQKEVKGIVTDVANDEEMVPRLLEFKAFADKLVATCFV
DAVPSPPGTAPSQSLASSSRTPTAAASQPAVQPNRDFAYGLIDAFQAGFKSRRIKPAEMI
AKHLDKAMRRGQKGKRDEDFAAELDEVLALYRFTDDMDVFRTFYQRALAKRLLLGRSASD
DFEKAVLKKLREQYDPDFGNGDKMFNDLDLSRELMARFYKEKKVDESSSLHKLTAMVLQR
SSWPFAARKTDILLPGWMQDDLSTFANYYKSKHQGRALDWDHALGTATLKARFKAGNKEL
SVSLYQAVILLLFNEEEELAYADIKEQTRLDDGELQRTLQSLACGKKRVLKKTPAGKEVN
MTDTFLFNVDFTDPRHVVHINSIQSKETPEETKRTQSSIEADRKHALDAAIVRVMKGKKE
LTYEQLKTATIEAVKNHFVPEVSMIKKRIEGLVEQEYLRRDEEDQNRFFYVA
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgacggacgtgtattcgctattcacatttcctacgacgtcgcgcggcttcagcgcgctg
ccctcgcagccccaagcgttcccgagcaccaaggattcgtcccggtctgcttctccccca
cgcaagatcgctcgtctggatggcgcgtctgatgctcactccgcttctgcccccagttcg
cgcgcaggtgttgctgagcctgcggacaagaggggtccgattgtcctgcgggtcgttggg
ccatcaattcaacctactcctgacggtgtgagcaatgaggaatacggcctcgttagacgc
actatcaagatactccttgatccagaggaaaagtcgcccttgccggctacgtatgatcgc
atctctcgtgcttgccgggctgtcgtgaacgaagcgggcagaggggagggactgtatgat
ttcctgaagatggagctggaacggcgagtcagtaaaatggaggagaaactggggggtgag
cctcgcaagagtgtggattggcttgttcctttcacggagacttgcgagtggtttgagaag
caagtgggcttgctgcaatctcttctcgcataccttgacacgctctatgttgcggaaaga
gggcatttaattgggacgaagcaattggcatacaccatgttcaccaatacagtcgtcaag
agcgttagagtcactgcggcaatcatggatggtattgccgactggcttgaatgggagcgg
acgcacaaagcgacacatccccttcggtcctaccttcccaagcttgttcgccatatgcgg
gcccatgatctctatgtggagattatcgagacaccgtacctcaacctaacgcacacctac
tatatcaaagagtccaatgaccttgcagatggtaacaagctcaaagcggacgaattcctg
gaacatgtcaaacgtcgctccgcggaggagcgaactcgggcagacgaggtattgattgag
agcagcgtgaagtcgatacatgatactacggacaacgccctccttgcaggaaggctccag
tggttggccaatgacgcacttgacacccttatcaagggccggaacgactctcaaatcaag
tcgatgtacgagctgttcgccaaggtcggcggccttaaagtgctcagtgccgcgttcaag
gtgcacgttcagaaagaagtaaagggtatcgtgacggacgtcgcaaatgacgaagaaatg
gtcccacgccttctcgagttcaaagcgttcgcggacaagctcgtcgcgacttgcttcgtc
gatgcagtcccctctcctcccggcacagcaccttcacaatccctcgcatcctcctctagg
actcccacggcggcggcttctcaacccgctgtccagcccaaccgagactttgcttacggc
ctcatcgatgccttccaagccggcttcaagtcgcgccggatcaagcccgcagagatgatc
gcaaagcacttggataaggccatgcggcggggccagaagggcaaacgcgacgaggacttc
gccgccgagctcgacgaggtcctggctctgtaccgcttcacggacgacatggacgtcttc
cgcacgttctaccagcgcgcgctcgccaagcggctgctcctcggccgcagcgcaagcgac
gactttgagaaggcggtgctgaagaagctcagagaacaatatgacccggactttggcaat
ggggacaagatgttcaacgaccttgatctgtcgcgcgagttgatggccaggttctacaag
gagaagaaggtggacgagtcgagttcgctgcacaagctgacggctatggtcctgcaacgg
agctcttggccgttcgcggcgcgcaagacggacatccttctcccgggatggatgcaagat
gacctctctacctttgcgaactactacaagtcgaaacaccaaggacgagcgctagattgg
gaccacgccctaggcactgcgacgttgaaggcacgcttcaaggcgggcaacaaggagctc
tctgtgagcctgtaccaagcggtcatcctgctgttgttcaacgaggaagaggaactggcg
tacgctgacatcaaggagcaaactcgattagacgacggcgagctgcagcggacgctgcaa
agtctcgcttgcgggaagaagcgggtgttgaagaagacaccggcggggaaggaagtgaac
atgacggacacgttcctattcaacgtcgactttacggacccacgccacgtcgtccacatc
aactccatccagtccaaagagacgcccgaagagacgaagcggacacagagctcgatcgag
gcggaccggaagcacgcgctggacgccgcgatcgtgcgggtgatgaagggcaagaaggag
ctcacgtacgagcagctgaagacggcgacgatcgaggcggtcaagaaccactttgtgccc
gaggtgtcgatgatcaagaagcggattgagggcttggtggagcaggagtacttgcggcgg
gacgaagaggaccagaaccggttcttctacgtcgcgtag

DBGET integrated database retrieval system