Dichomitus squalens: DICSQDRAFT_94992
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Entry
DICSQDRAFT_94992 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K13192
RNA-binding protein 26
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsq01009
]
DICSQDRAFT_94992
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_94992
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_94992
Protein phosphatases and associated proteins [BR:
dsq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
DICSQDRAFT_94992
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
DICSQDRAFT_94992
Spliceosome [BR:
dsq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
DICSQDRAFT_94992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
zf-CCCH
RRM_1
RRM_3
RRM_PARP14_3
zf_CCCH_4
RRM_8
Motif
Other DBs
NCBI-GeneID:
18845116
NCBI-ProteinID:
XP_007360075
JGI:
94992
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MLYDPDTANHLKPWLIRTLEPICDAEPSALADYILALLKHQAPESELRKELIAQLEEFLE
KECPPFVDTLFTALRTKSYLPYSATASSSSTGFASSSAAAGDSGIPIPVDALLSLNSSSP
ERSRKRGIDDDYDQHGPSKGARLSHDGQFSRYGGRGRGDDRSSWGGRGDRGARMELNGGR
ADYMDGGMQGMQMNANGRGGQGYRPPEQRRGICRDYHNNGYCARGVYCKYSHGDDAVIPS
QLFPMGPGGMPFLPMMGPGGMPFPINAAAGGVYDPHERMDMRPMGGMGIGRGQNARPAVL
PRTEDRDSSMGQNPGELPVIQDLTPQVPIEDVSPHNSGEAFRQQQQALPMDGVVPTGEMN
GGGPAPYLPGPSTDGHAPQQRPYNANGRGGGRGRGRGIFGGDAQSFRPTQKRDDKTLVVE
KIPEDRLSLGAVNDWFSKFGTVTNVAVDAASAKALVSFTNHEDAHKAWKSEEAVFGNRFV
KVFWHRPMEGHGQVGQRMLAASANVVAQRAVGTSAPTSSAAAPEGSPAPQPPTTSAAPAS
RTPSSSSSAAAALAAKQKLLEQQIAEQKSLMSLLTTASPEEKKHIMARLRKLGEEMKPSP
TPAAASSSLSPPAAPSFVPPKRAVSSTPRTEDQERAERERLDKELELQRAEGDGEEESTE
ELKAKLEKLKAEAASLGIPVTTDTSSSYGSSTYRPYRGRGRGGPRSFYRGATRGGPPRAS
MRLDNRPKKLLVKGASAESLQAVRDWYETTGQVESVETTDGGDVLVSFRSRAAAEQGFAK
GSHIALVGPVQVSWFTGHATGTLTQALSAATASSGTDSQKNATVTHSPSAPADDTDSHML
QEEVEPEAGGWAADEDGFGMM
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgctttacgaccctgatactgccaaccatctcaagccatggcttatccgaacacttgaa
ccaatatgcgacgcagagcctagcgcgctcgcggactacatccttgccctgctcaagcat
caggcgcccgaatccgagctacggaaagagctgatagcacagctggaggagttcttggag
aaagagtgccccccatttgttgacacactcttcaccgcgctgcggaccaagtcttacctc
ccctactccgcaactgcttcatcgtcttccaccggcttcgcctcgtcgagcgcggctgcg
ggcgacagcggcatccccatacccgtggacgcactcctctcattaaactcctcgtcacct
gaacgcagccggaaacgcggcattgacgacgactacgatcagcatgggccctcgaagggc
gcacggctgagtcacgacgggcagttttcgcgatatggtgggcgtggacgcggtgacgac
cggtcatcatggggcgggaggggcgaccgtggggcacgcatggagctgaatggtggacgc
gctgactacatggacggcgggatgcagggaatgcagatgaacgcgaacgggcgtgggggc
cagggttaccggccacccgaacaacggcgtggaatatgtcgggactatcacaacaacggc
tactgtgcgcggggcgtttactgcaagtacagccatggcgacgacgctgtcatcccctca
cagttattccctatgggcccgggtgggatgcccttcttgccaatgatgggtccgggaggc
atgccgttccctataaatgctgctgcgggtggcgtgtatgacccccacgagcggatggat
atgaggccgatgggtggcatgggtattgggcgcggccagaacgcacgaccagccgtattg
ccgcggacagaggatagagatagctctatgggccagaatcccggggagttgccagtcatc
caggatctgacacctcaggtgccgatcgaggacgtgtcgccccataacagcggtgaagcc
ttccgacagcagcaacaggcgctccctatggacggtgtcgtgcccacaggcgagatgaac
ggcggtggacctgccccctatctccctggtcccagtactgacggacacgctccacaacaa
cggccgtacaacgcaaatgggcgtggtggcggcagggggaggggtcgtggcatatttggc
ggcgatgcacagagtttccgccccacgcagaagcgcgacgacaaaacgcttgttgtggag
aagatcccggaggacaggttgtcgctcggggctgtcaatgactggtttagcaagttcggc
acagtcacgaatgtcgctgtcgatgctgcgagcgcgaaagctctcgtcagcttcaccaac
cacgaggatgcgcataaggcatggaagtcggaggaggccgtcttcggcaaccggttcgtc
aaggtcttctggcaccggcccatggagggtcacggacaggtcggccagcgtatgcttgcc
gcgtctgcgaacgttgtcgcgcagagagcagtagggacatcagccccgacttcctcagct
gctgcacctgaaggctcccctgctcctcaaccccctactacctccgctgcacctgcctct
cgcaccccttcttcatcgtcctcggctgcagccgcacttgctgcgaagcagaagctgctg
gagcagcagatcgcggagcagaagtcgctcatgtctctgcttaccacagcgtctcctgag
gagaagaaacatatcatggcccgcctacgtaaattgggcgaggaaatgaagccatctccc
acaccagcagccgcctcctcttccctgtctcctcctgccgccccctcatttgtaccccca
aaacgtgccgtgagctcgacacctcgcaccgaggaccaagagcgggcagagcgcgaacgg
ttggataaggagttggagctacagcgcgccgagggtgatggcgaggaagagagcaccgag
gaactgaaagcgaagcttgagaagcttaaggctgaggctgcgagcctcggcatacccgtc
accacggatacctcgtcctcgtatggcagctcgacataccggccgtaccgcggtcgcggc
aggggcggcccacgatccttctaccgcggcgcgacgcgaggcgggcccccgcgggcgagc
atgaggcttgacaaccgtccaaagaagctcctcgtcaaaggcgcgtccgcggagtccctg
caggccgtgcgagactggtacgagacgaccggacaggtagagtcggtcgagacgacggac
ggcggcgatgtgcttgtgtccttccggagtcgtgccgcggctgaacagggtttcgcgaaa
ggctcacacattgctttggtcgggcctgtgcaggtctcctggttcaccgggcatgccacg
gggactctcactcaggcactttcggcggccacagcgtcatctgggaccgattcgcagaag
aacgccaccgtgacacacagcccatcggcgcctgcggacgatacagactcgcacatgctt
caagaggaggtcgagccggaggcgggtggatgggccgctgacgaggacgggttcggcatg
atgtga
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integrated database retrieval system
