Dichomitus squalens: DICSQDRAFT_95920
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Entry
DICSQDRAFT_95920 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
dsq
Dichomitus squalens
Pathway
dsq04138
Autophagy - yeast
dsq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
DICSQDRAFT_95920
04148 Efferocytosis
DICSQDRAFT_95920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsq04131
]
DICSQDRAFT_95920
Membrane trafficking [BR:
dsq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
DICSQDRAFT_95920
Hops complex
DICSQDRAFT_95920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf_RING_Vps8_fungal
zf-RING_16
TPR_Vps41
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
18845194
NCBI-ProteinID:
XP_007360438
JGI:
95920
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MFDDYVEHASAPVPGSARGPLPPLQYEGFEPSPYDQDDARADIFQEQADLAPPPAPIFQL
GEVQCPLSAPLVSLVVSSDSLYMGLANNLIIQIELSRAEQFIRIQIPRKPNEFTIHKLFL
DPSGRHLLVTSVQGENWYFYRGWKKPRQLKSFKMIIESVAWNKASLLSSSHSTSTREMLI
GARNGTIYEAVLDAEEDFFKSQERYLQPVFTLPERHPVTGLKFDMFPPLDPKKVLVLVTT
ATRIYQFVGIPDRKSEDGGRVFSALFGSYRDTAPKIVELPGSPDVSELHVYSPNAEQAYS
LPRTVAWMNAAGIYHGNLDFGSNTDDLIDGAQLLPYPALVSSPSLSPTRQNATENATPIS
ISLTEFHFLLLYRDRVLGISNLNEQLAYEELLPLKPNEQVRGLTADPVRRTYWVYTDQSI
WEIGVTNEHRDVWKIYLEKGKFDVALQYATSAPQRDKVMSAQAQAFFNEGRYFQAAQCYA
QCSLSFEEVTLKFLDVGERDALRSYLISRLERTRKTDLSQRMMLATWLVEFYLSKCNELD
DLIASESVSQDVDNLLAERAILEEDLRHFFETYKANLEPTTVYELIQGHGRIDMYLHYAA
VVGDFDRVVEHWVMEEEWTKAIDVINRQPDLELYYRFAPVLMRHAPKETVDSWLRQRALD
PLRLIPAILRLQHAPRDPLSPNHAVRYLNHVIFEQGNISPMIHNLMITFYASTPTSTSTA
STTSINHPEDDGPLLRFLSTAPSDPLTGKPYYDLDYALRLCKQTGRTQPCVHIYSKMGLW
ENSVDLALEKGDLELAKINADMPEDDDQLRKKLWLKIAKYVVQDKQDIKMAMRFLENTDL
LKIEDILPFFPDFVVIDDFKEEICTALEGYSAHIDALKADMDEATKNAEAIKQDIAALQK
RFITVDATERCSHCALTLMTRQFYVFPCHHTFHADCLIGLTKEFLPAPALRRILALQTEL
MKSSQTTAIDRTAITNPSLLPATRHTPAPAPAQRTLLSANFAVGSVPGARGANALGRNLL
SAGDRLRDLIIPDALANLVTAPAGWIPGIGLGGGGAKRDVGEKDAEKAERTRRELEDLLA
ANCPLCESVVVGLDRPFVQVGEVDASWDL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgactacgtagagcatgcatcggcccctgttccaggctccgcccgcggcccg
cttccaccactgcaatacgaaggattcgagccttccccgtacgatcaggatgacgctagg
gcagatattttccaagaacaagcggatttggcacctccacccgcccccattttccagctc
ggcgaagttcaatgcccgctctctgccccccttgtctccctcgttgtgtcttccgactcc
ctgtacatgggactggccaacaatctcatcattcagattgagctttctcgagcagaacag
ttcatccgcatacagataccccggaagccgaacgagttcaccatacacaagctcttcctt
gacccctccggcaggcacctactcgtaacctccgtccagggggagaattggtacttctac
cggggatggaagaagccaagacaactgaagagcttcaagatgatcatcgagagtgtcgcg
tggaacaaagcctctctcttgtcatcctcgcactctacctctacacgtgaaatgcttatt
ggcgcaaggaacggaacaatctatgaggcggttttggatgccgaggaagacttcttcaag
tcacaagagaggtatcttcagcctgtgttcacactccccgaacggcatccggtgacaggc
ttgaagttcgacatgttccctcctcttgaccccaagaaggtactcgtgctggtgaccact
gcaactcgaatctaccagtttgtcggcataccggacaggaaatctgaggatggcggacga
gtgttttccgcgttgtttggcagctatcgggacactgcgccaaagatcgtggagctgcct
ggcagcccagacgtttcagagctgcacgtatacagtccgaatgccgaacaagcatactct
ctgcctcgaacagtggcgtggatgaatgctgccggtatctatcatgggaacctcgacttc
ggatccaacacggacgacctcattgatggtgctcagcttttaccgtaccctgcactagtg
tcttcaccgtcgttgtcaccaacaagacagaatgctaccgaaaatgcgacaccaatatcc
atatcactgacagagtttcatttcctgttgctgtatcgggatcgtgtcttgggaatttcc
aacctgaacgagcaacttgcctacgaagagttgctaccactgaaacccaatgagcaagtt
cgtggtctcactgcagaccccgttcggaggacatactgggtgtacaccgatcagtcaata
tgggagattggggtcaccaacgaacaccgagatgtatggaaaatctacctcgagaagggg
aagttcgatgttgcgctgcagtatgccacgagcgcgccccaaagagacaaggtcatgtcc
gcgcaagcccaggcattcttcaatgaagggcgctacttccaggctgcgcagtgctatgcg
cagtgttcactatcttttgaggaagtgacactaaagttcttggatgtcggtgaacgcgat
gcgctgcggtcgtatctgatctcgcgtcttgagcggacacggaagacggatctctcgcaa
cggatgatgctcgcgacatggctggtcgaattctatctcagcaaatgtaacgaacttgat
gacttgattgcttcggagtcagtatcgcaagacgttgacaaccttctcgctgagcgtgcc
atcctcgaggaggacctgcgacacttctttgagacttacaaggcgaaccttgaaccgacg
actgtctacgagctgatccaaggtcatgggcggatagacatgtatcttcactatgcagca
gtggtcggtgacttcgatcgagttgtcgagcattgggtcatggaagaggagtggacaaaa
gccatcgatgtcatcaaccggcagccggacctcgagctctactaccgattcgccccggtc
ctcatgcgacatgctcccaaagagaccgtcgattcgtggttgcgccagcgtgcactcgac
ccccttcgactcatccctgccattctccgtctgcagcatgcgcctcgtgacccactatct
cccaaccatgctgtacgttatctcaaccatgtcatattcgagcagggcaacatctcccct
atgatccacaacttgatgatcaccttctacgcatccaccccaacatcaacctccactgca
tcgaccacgtcaataaatcaccccgaggacgacggaccgctcctgcgcttcctgtcgacg
gcaccgtccgacccacttacaggcaagccgtactacgacctcgactatgcattacggcta
tgcaagcagactggccgaacacaaccctgcgtgcacatctactcgaagatgggcctgtgg
gagaatagcgtcgaccttgcgctcgagaagggtgacttagagcttgcgaaaatcaacgcg
gatatgcctgaggatgacgaccagctgcgcaagaagctctggctcaagattgcgaagtat
gtcgtccaagacaagcaagacatcaagatggcgatgcgcttcctcgagaacactgatctg
ctcaagatcgaagacatcctgccgttcttccctgatttcgtggtcattgacgacttcaag
gaggaaatctgcaccgcactcgaaggctactctgcgcacattgacgcgctgaaagccgac
atggacgaggccacgaagaacgcggaggcgatcaagcaggacatcgctgccctccagaag
cgcttcatcaccgtggacgccacggagaggtgctcgcactgcgccctcacgctcatgacc
aggcagttctacgtcttcccgtgtcaccacaccttccacgcggactgcctgatcggcctg
acgaaggagttcctccccgccccggcgctccgtcgtatcctcgccctccagaccgagctc
atgaagtcgtcccaaacgaccgcgatcgaccgcacggcgatcacgaacccctcgctgctc
cccgcgacgcggcacacgcccgcacccgcgcccgctcagcgcaccctcctctccgcgaac
ttcgccgtcgggtccgtgccgggtgcccgcggggcgaacgcgctgggccgcaacctgctc
tcggcgggcgaccgcctgcgcgacctcatcatccccgacgcgctcgcgaacctcgtcacc
gcgccggcgggctggatcccgggcatcgggctaggcgggggcggcgcgaagcgcgacgtg
ggcgagaaggacgcggagaaggccgagcggacgcggagggagctggaggacctgctcgcc
gcgaactgcccgctgtgcgagagcgtcgtggtcggcctggacaggccgttcgtgcaggtt
ggggaggtcgacgcgagctgggacttgtga
DBGET
integrated database retrieval system