KEGG   Dichomitus squalens: DICSQDRAFT_96073
Entry
DICSQDRAFT_96073  CDS       T03133                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
dsq  Dichomitus squalens
Pathway
dsq03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DICSQDRAFT_96073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsq03021]
    DICSQDRAFT_96073
   03019 Messenger RNA biogenesis [BR:dsq03019]
    DICSQDRAFT_96073
Transcription machinery [BR:dsq03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     DICSQDRAFT_96073
Messenger RNA biogenesis [BR:dsq03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     DICSQDRAFT_96073
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 Torus zf-CCHC zf-CCCH_4 zf-CCCH_RBM22 zf-CCHC_3
Other DBs
NCBI-GeneID: 18845204
NCBI-ProteinID: XP_007360485
JGI: 96073
LinkDB
Position
Unknown
AA seq 283 aa
MTTTTLSTNLQDIVSPKFHQNNFAEELYVKNDLGLKLDKDDQICRLSLTATGCPLGPLHC
PLRHTTPSVQNFQPPKQLPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC
WWYAKYGYCSAGDECLYAHPKERKVECPDYNRGFCRLGPNCPRKHVRRVACQLYLTGFCP
LGPDCPRGHPKPGIPPPKAYEPPEPPSVRDLGPPPPGYGRYADFDRGGGGGGNFPGAHPP
GLGGSGGPPGPRRNLEDVVCYKCGEKGHYANHCRHHSHKPYKR
NT seq 852 nt   +upstreamnt  +downstreamnt
atgaccactaccactctttctaccaatcttcaggacatcgtcagcccgaaatttcaccaa
aacaactttgctgaggaactctacgttaagaacgacctcggtctcaagctagacaaagac
gaccagatatgcagactgtctcttacagcgaccggctgccctctcggcccactgcactgt
cctctcagacacaccacgccctctgtgcagaacttccagccgcccaagcagctgcccaca
caccctcgtgaacgcgaacgtttggcgaccgtctgtaagcactggcttcgcgggctatgt
aagaagggcgacgcatgtgagttcttgcatgagtacaacctccgccgcatgcccgagtgt
tggtggtacgccaagtacggctactgttctgccggcgacgagtgtctctatgcgcacccc
aaggagcggaaggtggagtgtccagattacaacagaggcttctgcaggctcggcccgaac
tgtccccgcaaacacgtacgcagggtggcatgccagctatacctcaccggtttctgccct
ttgggacccgactgtccccgcggccacccgaaaccagggatcccacccccgaaagcatat
gaaccccctgaaccgccatcagtcagggacctcggtccgcccccaccgggttacggtagg
tatgcggactttgacagggggggtggaggagggggcaatttccccggggcccacccgcct
ggtcttggcggctccggagggcccccgggtccgcggaggaacctcgaagacgtcgtgtgc
tacaagtgtggcgagaagggccactatgcgaaccactgccgccaccactcgcacaagccg
tacaaacggtga

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