Dichomitus squalens: DICSQDRAFT_97337
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Entry
DICSQDRAFT_97337 CDS
T03133
Name
(RefSeq) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03022
Basal transcription factors
dsq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DICSQDRAFT_97337
09124 Replication and repair
03420 Nucleotide excision repair
DICSQDRAFT_97337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsq03021
]
DICSQDRAFT_97337
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_97337
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_97337
Enzymes [BR:
dsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DICSQDRAFT_97337
Transcription machinery [BR:
dsq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DICSQDRAFT_97337
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DICSQDRAFT_97337
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DICSQDRAFT_97337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
Motif
Other DBs
NCBI-GeneID:
18845292
NCBI-ProteinID:
XP_007361090
JGI:
97337
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MKFFIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCLLEMPSGTGKTVSLLSLIVSYQ
QFYPTKRKLIYCSRTVPEIEKALSELQRLMDYRRDCAETDEQREKEKNFYGIGLTSRKNL
CIHPEVSKEKKGKVVDARCRDLTNSAVCTKGRENPGSVELCDWHENLGKLEPGNLIPPGI
WTLADVLQHGRENKICPYFLVRRMMPFVDVIIYSFHYLLDPKVAEQVSKELTKDAIVVFD
EAHNIDNVCIESLSIDLTRPMLDSAARSVVKLGDKIDEIKKTDASKLQDEYAKLVEGLQE
ASNDEDAFVSNPVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLS
FLQHLKDITYIERRPLRFCAERLQSLVRTLELSRLDELSSLQKVASFATLVATYEKGFLL
ILEPFETDNATVPNPIFHLTCLDPSIAIKPVFERFSSVVITSGTLSPLDMYPKMLQFTPV
VQETYSMTLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGIV
AFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRGAVL
LSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGFDA
MRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETASNLSTDMALTL
SKQFMRMISQNPNENQTGISLWTLEDIEKAQAKQKELALLQEVERRDTALMDADDDDEYG
DGGIDDEALGAIDLDV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctttattgatgatctacctataatcttcccttatgaccgaatatatcctgaa
caatacgcgtacatgtgtgacctgaaacgaacactcgatgccacggggcattgtttactt
gaaatgccttcaggaacaggcaaaacggtctcccttctttctctcattgtatcatatcag
cagttctatcccacgaaaaggaaacttatatattgctcgcggacggtacccgagattgaa
aaggcactgtcagagctccaacgtctgatggattaccgtagagattgtgcggagacagat
gagcagcgcgagaaggagaagaacttctatggtattggtcttactagtcgcaagaaccta
tgcatacaccctgaggtatcaaaggagaaaaagggtaaagtggtggatgcacgatgtcga
gatcttacgaactccgctgtgtgcacgaaaggccgcgagaacccaggttccgtcgagctg
tgtgattggcacgagaaccttgggaagcttgagccgggtaacctgatcccgccgggaatc
tggacattggccgatgttcttcagcatggccgggagaacaagatctgtccctacttcctc
gtccgtcgcatgatgccattcgtggatgtcatcatctactccttccattatcttttggac
ccaaaggtagctgaacaggtgtcgaaagaactcaccaaggatgcaattgtggtcttcgac
gaggcgcataatatcgacaacgtctgcatagaatccttgagcattgacttgacgcgacct
atgttagattccgcagcgcgcagcgtcgtgaaactcggtgataagatcgatgaaatcaaa
aagacggatgcttccaaattacaagacgaatacgccaaactggtcgagggtctgcaagag
gccagcaatgacgaagacgccttcgtatcaaatccagtgctaccagaagatctcctcaaa
gaagcaatacctggaaatatccgaaaagcggagcatttcgttgccttcctcaagcgattc
gtcgagtacctgaagacgcgaatgcgtgtcttgcacgtggtagccgagacgcctctgtcc
ttcttgcagcatctgaaggacataacgtacattgagcggcgaccactacgcttttgtgcg
gagcgcttgcagtcacttgtgcggacactagagcttagtcgccttgatgagctttcgtca
ttgcagaaggttgcaagttttgctaccctcgttgcgacgtacgagaaaggctttttgctc
atcctggagcctttcgaaaccgacaatgccaccgttccaaaccctatttttcatcttaca
tgtctggacccctccatcgcgatcaagccagtattcgagaggttcagcagtgtcgtcatt
acgtctggaacgctgtcgccgctagacatgtaccctaagatgctgcaattcactccggtc
gtccaggagacctactcaatgaccctgacgcggaactcgttcttacctctggtcattacc
cgcggtagcgaccaggtggccatcagttcccggttcgaagtccggaacgaccctgcggtt
gtgcgcaacttcggtagcatcctcatcgaatactctaagatcgtgccggacggcatcgtc
gcgttcttcccgagctacctctacatggagagcattgtagccgcctggaacgacatgggt
atattgaacgaggtatggaagcacaagctcatcttcgtggagacgccagatgcgaacgag
acgagtatagccttagagaattaccggagggcgtgtgacaacggccgaggcgcggttctc
ttgtctgtcgctcgtggcaaggtgtcagaaggaattgacttcgatcacaactacggacgg
gccgtaatcatgttcggggtgccgtatcagtacaccgagagccggatcctcaaggcgcgt
ttggagtatcttcgtgatgcgtaccggatacgcgaatccgagttcttgggtttcgacgca
atgcggaacgctgcacaatgcgtcgggcgtgtcttgcggggtaagacagactgggggttg
atggtgttcgcggataagcgtttcgcccgggctgacaaacgggccaagctgccccggtgg
atcaatcaatacatcacggagacggcctccaacctctcgacggacatggcgctcactttg
tcgaagcagttcatgcggatgatctctcagaacccgaacgaaaaccagaccggtatctcg
ctttggacgctcgaggacatcgagaaggcgcaggcgaagcagaaggagctggcgctcctg
caggaggttgagcggcgtgacacggcgttgatggacgctgacgatgacgacgagtacggg
gatggcgggatcgatgacgaggcgttgggagcgatagaccttgatgtataa
DBGET
integrated database retrieval system
