Dichomitus squalens: DICSQDRAFT_97824
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Entry
DICSQDRAFT_97824 CDS
T03133
Name
(RefSeq) DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DICSQDRAFT_97824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_97824
Enzymes [BR:
dsq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DICSQDRAFT_97824
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DICSQDRAFT_97824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
18845328
NCBI-ProteinID:
XP_007361328
JGI:
97824
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MSVAVPAGFRALPLPLAQLSLAAVLKCGQSFRWSIFPLDVPSNSALGTNSPTHEYRLCLR
DRVVCLRQSPDTLFYRSVFPPLVSEDEETREAGTLAWIRDYFQLNVDLVDLYRQWSLADP
IFKRIQDRFEGIRMLRQDPFENLISFICSSNNNISRITKMVTSLCRTYSPALLSLPPPAG
TNLPEEAYHPFPSPSALAAADVTAKLRALGFGYRADFIQKTAAMLVETHGLTRNPETSME
ASEEWLMTLRHLGTPEARAELLNFMGVGRKVADCILLMSLDKREVIPVDTHVQQIAIKHY
GFRGPTKSGTMSPKVYEELSSKLAAVWGDYAGWAHSVLFTSDLKSFAAYGLASPSGLSTP
STPGLTPDRSVNQPMDSPGGATPRSTPRPQSTKRKRGGPKRSGDKAPSSESETEETLAQL
EVAVKVALPDESGQSTLVDRVKRRRRGNVSVR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcgcggtgcctgccggttttcgagccttacctctgcccctcgcccagctttcc
ctcgccgctgtactcaaatgcgggcaatcgttccgatggagtatattccctctcgatgta
cctagcaactcagctctgggaaccaactctccaacacatgaataccgcctctgtctgcgc
gaccgcgtggtatgcctacgccaaagcccggacacactcttttatcgctctgttttccct
cccttggtttctgaagatgaggagacgcgagaggccggaacccttgcttggatcagggac
tactttcagttgaacgtagatttggtggacctctaccgtcaatggagcttggccgacccc
atcttcaagcgaatacaggaccggttcgaagggattcgcatgctaaggcaagatccgttc
gaaaatctcatctccttcatctgctcctcaaataacaacatatcccgtatcacaaagatg
gtcacctccctttgtcgaacatactcccctgctctccttagcttgcctccacctgctgga
acaaacctgccagaagaggcgtatcaccctttcccgtcgccatctgcgcttgcagcagca
gacgtcactgcaaaactgcgagcccttggctttggctatcgagccgacttcatacaaaag
acagccgctatgctagtggaaacccacggtcttacgcggaatcccgagacgtccatggaa
gcatcagaggagtggctcatgacgctgagacatctgggaactcctgaagcgcgagccgag
ttgctcaatttcatgggcgtcggtcgcaaggtggccgactgcatcttactcatgagtctc
gacaagagggaggttatacctgtggacacacacgtgcaacaaatagcaattaaacactac
ggctttcgtggtccgacgaagtcgggtaccatgtcaccaaaagtatacgaagaattgagc
tccaagctagcagcagtgtggggagattatgccggctgggcgcactctgtgttatttacg
tcagacctcaaatcgttcgctgcatacggccttgcttccccttccggactatcgacgcct
tctacccctggcctaactccagatcgcagtgttaaccaacccatggatagtcccggaggg
gcgacgccgaggagcactcccagacctcaatcaacaaaacgaaagcggggcggtccgaag
cgttctggtgataaagcaccttcatcggaatcggagacggaagagacactggcacagctc
gaagtcgcggtgaaggtcgctctccccgatgagtcgggacagtcaaccctggtagaccgc
gtgaagaggcgcaggcgagggaatgtctctgtccgatag
DBGET
integrated database retrieval system
