Dichomitus squalens: DICSQDRAFT_97866
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Entry
DICSQDRAFT_97866 CDS
T03133
Name
(RefSeq) Utp21-domain-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
dsq
Dichomitus squalens
Pathway
dsq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DICSQDRAFT_97866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_97866
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DICSQDRAFT_97866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_2nd
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_NWD2_C
Utp12
Hira
Beta-prop_DCAF4
PROPPIN
PQQ_2
Microp_apicomplexa_18
WDR54
Motif
Other DBs
NCBI-GeneID:
18845331
NCBI-ProteinID:
XP_007361345
JGI:
97866
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MGAKKETRSSPPPRKRARVEAPHSPNFKQGPRLFAPFRALGLITNNVPFVLQTRSHKGAT
DGPRIHLLTCLGRAWALWEGGKMGLLFVGPDAPGPIASMAMDGNAVWVSSGLYVMKYIRG
KEVARLTNPLETSLTHILVFGPQLLAVTDDGNRMLVWDTESEELQTTIQFEPGFTAIMIH
HPATYLNKVLVASSEGSMQLWNIRTQTLIHTFPAACLLTSPSKTTSTAITALARSPAIDV
IGIGFSSGEISVYDIRADERLMRMVMQDGGIRAMSFRSDSQPILATASSTGHIALWDLNS
GGRLLHIVRGAHDGAVTALEWVPGQPVLISSGEDNSVKQWLFDSPTEAPRLLKFRSGHHA
PPHLIRYYGEDGKQLLTASRDRSLRCTSVVRDSRSFELSQGSLAKKATNLSIPIASLKFP
AVTTLSYSATRAKDWDDILTAHTDEAVARTWTMKDKRVGKHVFNVAAEKKKGGTVGSVKA
VCVTACGNFGITASSTGIINMYNMQSGILRRTFDIGPCPANVPSRFRPAAGKKKEERCVT
GLASDALDRTLVASTLDGTINFFDFHTAALEHTLVLPSAAVSITLHRDSGLLAVICDDLV
VRVVDIETRRVVREFGGFRGRVLDVTFSPDSRWLVTTSLDSIIRTFDMPTGRLIDAFRTS
SVATSISFSPTNDFLATAHVDSVGVYLWANRAQYSEVPFQSIVEEDVTDISLPSMQGLAE
DEALDALSALTVEDKPADVFTTPPQLDGELVTFTLLPRSRWQTLLNLEVIQQRNKPKEPP
KQPEKAPFFLPTLPGVEQRFAVDQQKAQQETKKPTKRLQRAAGETESVFHKKLAEAHESH
SSDYEEFFNYAKALSPAAMDLELRSLVSLDSLRMFIGALTSRLLSHRDFEAVQTFMNVFL
RMHGDVLTTNEELRNELETLAETQRKKSERLLELLASSLGTLGFVRDTM
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaaagaaagaaacacgctccagtcctcctccaaggaaacgggctcgtgttgag
gcaccccactccccaaacttcaagcagggaccccgtctcttcgcgcccttccgcgcactc
ggccttatcacgaataatgttccatttgtgctccaaacacgctcacataagggcgcgacc
gatggacctcggatccatctgcttacatgcttaggaagggcatgggcgttatgggaagga
gggaaaatgggcctactgtttgtaggtcccgatgctccagggcctatcgcttctatggct
atggacggcaacgctgtatgggtctcctcgggtctgtacgttatgaaatacatccgcgga
aaagaagttgctcgcctgacgaatccccttgagacctcgttaacacatatacttgtcttc
ggcccgcaacttctcgccgtgaccgacgatggtaatcgaatgctagtttgggacacagaa
agcgaagagctccaaacaaccatacagtttgagcctggcttcaccgctatcatgatccac
cacccagcgacctacctgaacaaggttctggttgccagcagtgaaggcagcatgcagcta
tggaacatccgcacccaaacactgattcatacattccctgccgcatgcctcctgacctct
ccttcaaagaccacctcaaccgccatcacggcgctcgctcgctcaccagccatcgacgtc
atcggtattggcttctcttcaggagagatctccgtatacgatatccgcgcggacgaacgt
ctcatgcggatggtcatgcaggacggcggcatccgcgccatgtccttccggagtgacagc
caacccatcctcgcaacggcctcatcgactggacacatcgctctgtgggacctcaactct
ggcggacgcctcctgcacatcgttcgtggcgcccatgacggggcagttaccgcgcttgaa
tgggtgccaggacagcctgtactcattagctctggcgaggacaacagtgtcaagcaatgg
ttgttcgactcgccaaccgaggcgccacgtctgctgaagttccgctcagggcaccatgcg
ccgccgcatcttatccggtactatggcgaggatggcaagcagctcttgacagcctcacga
gaccgcagtttgagatgcacgagtgtcgtgagagactcgaggagtttcgagcttagccaa
ggttcattggcgaagaaggctactaacctgtctatcccaattgcctcgctcaagttccct
gctgtcactaccctgtcatactccgcgactcgcgccaaggactgggacgatatcctgaca
gctcacaccgacgaggcagtagcacgaacgtggaccatgaaggataagcgagtagggaaa
cacgtttttaacgtcgctgccgagaaaaagaaaggcgggactgttggctccgtcaaggct
gtatgcgtaacagcatgtggcaactttggcatcaccgcgtcctcgacagggatcatcaac
atgtacaacatgcagtccggaattctgcgacggacattcgacatcgggccctgtcctgcg
aacgttcccagtcggttccgtcccgcggcaggcaagaagaaggaggagcggtgtgttacc
gggcttgcaagtgatgctctcgatcggacactcgtggcgagcacgctcgacggcacaatc
aatttctttgacttccacacagcagcgctggaacacacacttgtcctgccctccgccgcc
gtatcaatcaccctgcaccgcgatagtggtctgcttgcagtcatctgcgacgacctcgtc
gtgcgcgtagtggatattgagactcggcgggtggtccgggagtttggtggcttccgcggc
cgcgtcctcgacgtaacattctcgccagactcaagatggctcgtcacaacgtcacttgat
tcgatcatccgcacgttcgacatgccgaccggccgtctcatcgatgccttccggacgtcg
agcgtcgccaccagcatctcgttttcgccaacaaacgacttcctcgcgacggctcacgtg
gatagcgtcggcgtatacctgtgggcaaaccgcgcacagtactccgaggtccccttccag
agcatcgtcgaggaagacgtcacagacatctccctgccctctatgcaaggattggcagaa
gacgaagccctagatgctctctctgcgctcacagtggaagacaagcctgcggacgttttc
acaaccccgcctcagctggacggggaacttgttacgttcaccctcctcccgcgctcccgc
tggcagaccctcctcaacctcgaggtcatccagcagcgcaacaagcccaaggagccgccg
aaacagcccgagaaggctccgttcttcttgcccactctgccaggggtcgagcagcggttc
gcggtggaccagcagaaggcgcagcaggagacgaagaagccgacgaagcggctgcaaagg
gccgcgggcgagacggagagcgtgttccacaagaagcttgcggaggcgcatgagagtcac
tcgtctgattacgaggaattcttcaactatgcgaaggccctctcgccggcagcaatggac
ctcgagctgcgctctctcgtatctctggattcgttgcggatgttcatcggcgcactgaca
agccgtctgctctctcatcgcgactttgaggcagtgcagaccttcatgaatgtcttcctc
cgcatgcacggcgacgtgctcacgacgaatgaggagctgcgcaacgagctcgagacgctt
gcggaaacacagcggaagaaaagcgagaggctgttggagctgcttgcgtcgtcgttgggc
actctgggtttcgtacgggatacgatgtag
DBGET
integrated database retrieval system