Dichomitus squalens: DICSQDRAFT_98635
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Entry
DICSQDRAFT_98635 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
dsq
Dichomitus squalens
Pathway
dsq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DICSQDRAFT_98635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_98635
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DICSQDRAFT_98635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
TPR_14
Motif
Other DBs
NCBI-GeneID:
18845394
NCBI-ProteinID:
XP_007361736
JGI:
98635
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MERVQFQQEQMLTELKDLVQKGLFSQKEVKHIMQKRTAFETALVRRIPKKSDFLRYATYE
MSLEALRRKRAERLKIAKGPPSVSDYALVRRQFQIFERALKKFKGDVGLWIQYILVAKKE
GARALVGRITARALQLHPNVPALYVLAASHELEHLSPTAARALLQRGLRLNSDSVEMWRE
YVRMELGFVESLRRRWSVLGIDMQRKGEDAGSGKGKGKERESGTDDIWSGIGDEEGEADG
MDVDAEQDLPEDEVARRHIMEGAIVKSVISSAVKAIPRIDLFASLHELISTYPSPPTLRE
SLLDHLHDHLRETLPSLPAAIKLSATRNLTPDMVGEPLVDALKSANEQLIAAVRTAANSS
DPGVAKVYSEFVEEWCGQEVDDSLKAYLITSVHLLIQQLPAPVPPDLLAAHIRLLSSHQA
SLGSALLPPKANTPDKILRVARKHTSKAPTRSIVWLARLAAEKQFAEPKDVEQAWTEARK
RVEVDGIQDVWLWGLDPENRATLRSTAATDETSPSTQHDDSEADANAELQLLELLLHESQ
LIQDPAAASALHEVLLIRYAAASHRALALLYWPKITHDDRHGSTSAIAAPPAARSPSRGG
KAEKASELAQRGSARAQPAWRTQDPDVSNSREAYGSQSSSTSAAGSTCRPPVDARLARVR
RIGTAYVPSARVWSEVFSQESGGVSHAVTSGADITADGGQVYSGHVDDDARVLRSVYEYW
RQRDGVGATIAWAAWLLRTGDGKEAVAVISRARSVLGETDGETVERRWKAVLDGQDSREG
GAGEEHGEDGRADAGPIDSRGT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggaacgagtacaattccagcaggagcagatgctcactgagctgaaggacctcgtccag
aagggtctgttctcacaaaaagaggtgaagcacatcatgcaaaagcggaccgcgttcgaa
actgcacttgtgcgacgcataccgaagaaaagcgacttcctccgttacgcaacttacgaa
atgagcctagaggcgctacggagaaagcgtgcggaacgtctaaaaatagcgaagggacct
ccgtcggtgtccgactatgccctcgtccgacgacaattccagattttcgaacgcgccctc
aagaagttcaagggggatgtcggcctttggatccagtacatcctagtcgcgaagaaggaa
ggggcgcgtgcattagtcgggcgaatcaccgcacgggccctccaactgcaccctaacgta
cctgcgctgtatgtgctcgcagcctcccatgaactcgagcatctttcacccacggctgct
cgtgcgttgctgcagcgtggcctgcgtctgaactccgacagcgtcgagatgtggagagag
tatgtgcggatggaactggggttcgtggaaagcttgagaagaaggtggagcgtgttggga
atcgatatgcagcgtaaaggcgaggacgccggttcgggaaaaggcaagggcaaagagagg
gaaagcgggacggacgatatctggagtgggatcggagacgaggaaggagaggccgatggc
atggacgtggatgctgaacaagacttgccggaagacgaggtcgcacggagacacattatg
gagggtgccatcgtcaagtccgtgatctcaagtgcggtgaaagcgataccgaggatcgac
ttgttcgcttcacttcatgaactcatctccacctacccttccccgcccacgctccgcgaa
tctctcctcgaccacctacatgaccaccttcgtgagactcttccctcgctcccagccgca
atcaagctttccgcgacgcggaatctcacgcccgacatggtgggagagcctctcgtggac
gcactgaagagtgcgaacgagcagttaatagctgccgtgagaactgccgccaactcaagc
gatccaggtgtcgcaaaagtgtattccgagtttgttgaagaatggtgcgggcaggaggtt
gacgatagcctgaaagcctacctgatcacgtccgtccacctcctgatacagcagcttccc
gcccctgtcccacccgacttgctcgcggcacacatacggctactgtcgtcacatcaggcg
tccctcggatccgcgctgcttccgcctaaggcgaacacgcccgacaagatactccgcgtg
gcgcgcaaacataccagcaaggcgcccacacggtctatcgtgtggcttgcgcgacttgcg
gctgaaaagcagtttgccgagccaaaggacgtggaacaagcatggacggaggcgcgaaag
cgcgtcgaagttgatgggatccaagatgtctggctctggggactcgacccggaaaatcgg
gccacgctccgctcgacagcagcaacagacgagacctcgccatctacgcaacatgacgac
agcgaagctgatgcgaatgcggaattgcagctgctggagcttttgctgcacgagagccag
cttatccaggatcccgccgcggcgagcgcgctccacgaggtgctcctgatacggtacgca
gcggcctcgcaccgcgcgctggcgctcctctattggcccaagatcacgcacgacgaccgt
cacgggagcacgtcagcgatcgcggcaccgccagccgcacgatcgccctcgcggggcggc
aaagctgagaaggcgagcgagctcgcgcaacgcgggagcgcacgtgcgcagccggcgtgg
cgcacacaagacccggacgtctccaactcgcgagaagcttacggctcgcagtcgagctcc
acgtcagcagcaggcagcacttgccgtccacccgtcgacgcgcgccttgcacgcgtgcgc
cgcatcggcaccgcttacgtgccctccgcgcgggtgtggtccgaagtgttcagccaggag
tcgggtggggtcagccacgccgtgacgagtggggctgatattactgctgatggcgggcag
gtctattctgggcacgtcgacgatgacgctcgcgtgctgcgctcggtatacgagtactgg
cgtcagcgagacggggtgggggcaactatcgcgtgggccgcgtggttgctgcggacaggg
gacgggaaggaggcggtagccgtcatctctagggcgcggagcgtgctcggggaaaccgat
ggcgagacggtcgagaggaggtggaaggcggttctcgatgggcaggattcccgcgagggg
ggcgcgggagaggaacacggagaggatggccgtgcggatgcgggtccgatagattcaaga
ggcacgtag
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