Dichomitus squalens: DICSQDRAFT_99784
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Entry
DICSQDRAFT_99784 CDS
T03133
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10756
replication factor C subunit 3/5
Organism
dsq
Dichomitus squalens
Pathway
dsq03030
DNA replication
dsq03410
Base excision repair
dsq03420
Nucleotide excision repair
dsq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DICSQDRAFT_99784
03410 Base excision repair
DICSQDRAFT_99784
03420 Nucleotide excision repair
DICSQDRAFT_99784
03430 Mismatch repair
DICSQDRAFT_99784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsq03032
]
DICSQDRAFT_99784
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_99784
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_99784
DNA replication proteins [BR:
dsq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DICSQDRAFT_99784
DNA Replication Termination Factors
ELG1-RFC complex
DICSQDRAFT_99784
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
DICSQDRAFT_99784
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DICSQDRAFT_99784
Check point factors
HRAD17(Rad24)-RFC complex
DICSQDRAFT_99784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
AAA_assoc_2
AAA_22
Rad17
Motif
Other DBs
NCBI-GeneID:
18845479
NCBI-ProteinID:
XP_007362371
JGI:
99784
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MSLWVDKHRPRSLDQLHYHHALSARLKALAASGDFPHMLFYGPTGAGKKTRIAGTLLELF
GKGVEKLKIDQRVFLTPTKRKLDVNIVQSNFHIEITPSEVGNYDRVVIQEILKEIAQTQQ
VDLSAKQKFKLVVIHEADSLTRDAQAALRRTMEKYMTNMRLILCANSTSKLIAPIRSRCL
LMRVAAPSEEEMRAVLDYVGKREGFAIPDDTARLIAQDANGNVRKALLVLEALKMQNTDL
SSSALSIAKPDWETYCHKVADMIIQEQSPARVMEVRAKLYELLSHCIPPSVVIKTIAEKV
VDQVDDALKADIMHWAAIYEARMRVGNKKIFHLEAWVVKVMSLYKHFFLGFDMDAGFDDF
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtccctttgggtagacaagcatcggccccgttctcttgaccaactccactaccaccat
gccctctctgcacgcctcaaggctctcgccgcctcgggagacttcccccacatgctgttc
tatgggcccacgggcgccggcaagaagacgaggatagcgggcaccttgctcgagctcttt
ggcaaaggcgtagagaagctcaaaattgaccaacgtgtcttcctcaccccgacaaaacgc
aagctcgacgtcaacatcgtccagagcaacttccacatcgagatcaccccaagcgaggtc
ggaaattacgaccgagtcgtcatccaagagatcctgaaggagatcgcgcaaacacagcaa
gtcgacctcagcgcgaagcaaaagttcaagctggtcgtcatccacgaggcggattccctc
acgcgcgacgcccaggcggcgctccgccggaccatggaaaagtacatgaccaacatgcgc
ctcatcctctgcgcgaacagcaccagcaagctcatcgcgcccatccgctcccgctgcctc
ctcatgcgcgtagccgccccgagcgaggaagagatgcgggctgtgctcgactacgtgggc
aagcgcgagggcttcgcgatcccggacgacacggccaggctcattgcgcaggacgcgaac
ggcaacgtccgcaaggcgctcctcgtcctcgaggcgctcaagatgcagaacaccgatctg
tcctcgagcgcgctgagcatcgcgaagccagactgggagacgtactgccacaaggtggcg
gacatgatcatccaggaacagtcccccgcgcgcgtgatggaggtccgcgcgaagctctac
gagctcctctcccattgcatcccgccctcggtcgtcatcaagaccatcgcggagaaggtc
gtggaccaggtcgacgacgccctcaaggcggacatcatgcactgggcggccatctacgag
gcacgcatgcgcgtgggcaacaagaagatcttccatctcgaggcgtgggtggttaaggtc
atgtcgctctacaagcatttcttcctcggcttcgacatggacgcgggcttcgacgacttc
tag
DBGET
integrated database retrieval system
