Dichomitus squalens: DICSQDRAFT_99919
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Entry
DICSQDRAFT_99919 CDS
T03133
Name
(RefSeq) DEAD-domain-containing protein
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_99919
Enzymes [BR:
dsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DICSQDRAFT_99919
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
Pre-60S particles
Helicases
DICSQDRAFT_99919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
18845496
NCBI-ProteinID:
XP_007362454
JGI:
99919
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MAQTAVAPSLTPQGPKTKTKAKKRYLKAKKERRKKRKALPGTAHRTESSRRDEEDESGSD
EAEPSGSESEGASAAEQVDAPPKIALPAKRGDGERPKKRRKIDTEEPDARHASSPEDDEV
AEPPAQPSSAPRPRSATPPVALPAFPQPRRPEAPSKSVLALQGLDKALIEAEVVDPATTV
PLDAAKDAQDERTGLSGRMRRRLQDLGITELFAVQTAVVPLLLSSPRSRALYRPYDPPED
LCVSAPTGSGKTLAYVLPIVEILSSRVVTRLRALVVLPTRDLVLQVRETFEAIAKGRGLK
IGTATGQHSFAHEQAQLVAERNEELQGGSSKVDILICTPGRLIDHLNGTPNFSLQHLRFL
VIDEADRLLAQSFQDWLAQVLAATRPPRASDDSGASLSSELTTASINLAARGRPHPDSLS
PTFLHLLRGVHYVRTDYDEKKEPSCQKLLFSATLTRDPAKIAALGLRQPKYVVVQSPKTS
AASKEEGVLDFVMEKFTMPATLTEHMVVCESSVKPLMLFHLVHARGVTNALVFTKSAEST
ARLVRLFEFFESAHSDSQGRRIVARAYSSDLAPGERKSILEQFKSQDVQLLVCSDLISRG
IDISHVSHVVSYDVPVDFRKYVHRVGRTARAGRAGDAWTLVEEQEARYFKTMLKEADHLD
KVKRVRVADADVEPLKPAYEVALARLKESYARSS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggctcagacagcggtcgcgccctctttgactcctcaaggacctaagacgaagacgaag
gcgaagaagcgatacctcaaggccaagaaagagagacgtaagaagcgcaaggccctccct
ggcaccgcgcatcggactgaatcttcgagacgcgacgaggaggacgagtccgggtccgac
gaggcagagcccagcgggagcgagagcgaaggtgcgtcagcagcggagcaggtggatgct
cctccgaagattgctcttcctgcgaagcgcggggacggagaacgaccgaagaaaagacgt
aagatcgacaccgaggagcccgacgcacgacacgcctcgagtccagaagacgacgaggtc
gccgagccccctgcgcagccctcgagcgcgccccgtccaaggtccgctactcctccagtg
gccctcccggcgttcccccagcctcggcgaccggaggccccgtcgaagtcggtgctcgcg
ctgcaagggctcgacaaggccttgatcgaggcagaggtcgtcgaccccgcgaccaccgtg
ccgctcgatgctgccaaagacgcacaggacgagcggacggggctgagcgggaggatgcgg
aggaggttgcaggatctcggtatcactgaactctttgctgtacaaactgctgttgtgccc
ttactcctctcttcgccaagatcgagagcgctgtaccgaccctacgatccaccggaagac
ctgtgcgtgtctgcgcctaccggaagtgggaaaactttagcttatgtcttgcccatcgtc
gagatcctatcatcccgtgttgttactcgattacgtgcactagtggtcctgccgacgcgc
gatttggtattgcaagtgcgagaaacgtttgaagcgatcgcaaagggtcgcggtttgaaa
ataggtacagcaactggacagcattcgttcgcacacgagcaagcacagttagtagcggag
cgaaatgaagagctgcaaggtggctcgagcaaggtggacatactcatatgtacaccggga
cgtttgatcgaccacctcaacggcacgcccaacttctccctacagcacctacgcttcctt
gtcatcgatgaggccgatcgactgctcgcacaatcgttccaagactggctagcacaagtg
ttagcggcaacacgaccaccacgggcttccgatgacagcggggccagcctgtcaagcgag
cttacgactgcttcgattaatctcgcagccagaggacgaccgcatcctgattctctatcg
cccaccttcctccacctgctgcgaggcgttcactacgttcgtacagactatgacgagaaa
aaggagccatcctgtcagaagctgctgttttccgcgacgctcacgcgggaccctgcgaag
atcgccgctctggggctccgccagccgaagtacgttgtcgtgcagagcccgaagacgtcg
gcagcgagcaaggaggaaggcgtcctcgacttcgtgatggagaagttcaccatgccagct
acgctcacggaacacatggtcgtgtgcgagtcctcggtcaagccgctcatgctgttccac
cttgtccacgcgcgcggggtcaccaacgcgctggtcttcaccaaatccgcggagtcgacg
gcccgtctcgtccggttattcgaattcttcgagagcgcgcacagcgactcgcaagggagg
aggatcgtcgcacgggcgtactccagcgatctcgcgcctggggaacgcaaatccatcttg
gagcagttcaagagccaggacgttcaattactcgtctgctcagaccttatctcgcgcggc
atcgacatcagccacgtctcccacgtcgtaagctacgacgtccccgtcgatttcaggaaa
tacgtccaccgcgtcggccgaaccgcgcgggctggccgggctggggacgcgtggacattg
gtcgaggagcaggaggcgaggtatttcaagacgatgcttaaggaggcggatcacctggac
aaggtgaagcgcgtgcgtgtcgcggatgcggacgtcgagccgttgaagcccgcatatgag
gtagccttggctcgcttgaaggagtcctacgcccgctctagttga
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