Drosophila serrata: 110176127
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Entry
110176127 CDS
T06108
Name
(RefSeq) LOW QUALITY PROTEIN: probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dsr
Drosophila serrata
Pathway
dsr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110176127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsr03400
]
110176127
DNA repair and recombination proteins [BR:
dsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110176127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
110176127
NCBI-ProteinID:
XP_020798022
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MSKKLNTSVGGTPTNTLFNYFTKSPAVDKXKLTPSVKTEPDTTTEKENLKNAQPKVEKAK
EASKPAAKRKLPMSEGSGDEQDGQRKRKRIVQPESESEEDMEVTKSEEDFSEGASDYEPD
ANEDSDDSVSSGEDEVEEPSEMDTSVDSPVVKKSHKKSKNININNNNIEPSSKKVKLETT
TTPQLAEGTTFQEKLKNLQSNAKKDAAYDDIVTSTSNLDEPVVWPHQKLEFLQPDKIKDK
AGRRPDHPDYDCSTLHVPEKFLNSLSPGVRQWWVLKSDNYDCVLFFKVGKFYELYHGDAD
VGVNELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTETPDMMTERCKRIKP
TKFDKVVAREICQITNRGTQVFGSQCQIGPNHQPNYMLALVEQDEGTWSRYGVCFIDTSI
GDFHLGEFEDDKNCSRLLTLLSHHMPVLLLNEKSSLSQRSQQIVRTVLGGILREQLPSNG
PQGCNAEKTLKLLAERYYAGKADGSDDNWPLVLRTMQSDLDHLGLTPNEDYKLALKALGQ
CIFFIHKCKLEPKVLPMARYQLYVPPDQIAEDARQDIKPRASTLRRSHMVLDATTLSNLR
IIGEDHSLLSTLDHCCTKFGKRLLHHWLCAPSCDVAVIEERQEAVGELIRMSSELQEMRA
LLAPMPDFERNLAQIHLFGNKQIKDMNHPDSRAILFEEKLYNKQKLRGFISVLNGFKSLT
KLPMIFHQCESALLKRITQLPESGGTFPDLSKELKYFETAFDHEAAAKTGVIAPQAGMDA
EYDSAMDAIEAIEGRLKTYLVEQERHFGCRVTYFGSDKKRYQLDVPETHANKANKSYSLE
GQTKGKKPSRRYTTAETRALLKDMQHAEDTRNMVLKDLARRLFEKFSNHYEQWKQCIDCV
ANLDVLGSLAEYAGQQITICVPELVSGADQPFIQLEEGYHPCVNASTYIPNGLELGTEKE
APLSLLTGPNMGGKSTLMRELGLLVIMAQIGAHIPATSCRLSLVDRIFTRLGAQDDILAG
HSTFLVELNETSLILKHATCHSLVLLDELGRGTATYDGTAIAASVVNFLANLKCRTLFST
HYHNLIDFFHNDKRITLGHMACMVENEDNADPTQETVTFLYKYTAGACPKSYGFNAAKLA
GMPHGIIKRAYELSKKVEAIALQRKITAKIVAAAAGKDEGLKKEKLNVLKDLMQQLKMCH
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagttgaacacaagtgtggggggaacgcccacaaacacactgtttaattat
ttcaccaaatcaccggctgtcgacaagnaaaagctgacgcctagcgtaaaaaccgaacca
gacaccaccaccgaaaaggagaatctcaagaatgcccaaccgaaagtggagaaagcaaaa
gaggcatccaagccagcggccaagcggaagctgcccatgtccgagggttcaggagatgag
caggatggccaacgcaagcgaaagcgcatcgtccaacccgaatcggagagcgaggaggac
atggaggtcaccaaatctgaggaggacttctcggagggcgcctccgactacgagccagat
gccaatgaggacagtgacgatagcgttagcagcggagaggacgaagtcgaggagcccagc
gaaatggacacatccgtggacagtcccgtggtgaagaagtcgcacaagaagtccaagaac
atcaatatcaacaataataacatagagccctccagcaagaaggttaaactggagacgacc
actactccgcagttggccgagggcaccaccttccaggagaaactcaagaacctgcaaagt
aatgccaaaaaggatgccgcctacgatgatatagttaccagcacctcgaacctggacgag
cctgtggtttggccccatcagaaactggagttcctgcagcccgacaaaatcaaggacaag
gcgggacggcggccagatcatccggactacgattgcagcactttgcatgtgccggagaag
ttcctcaacagcctgtccccgggtgttcgccagtggtgggttctcaagtcggacaactat
gactgcgtgctgttcttcaaggtgggcaaattttatgagctttaccacggcgatgcagat
gttggcgttaatgagctgggcttcacctacatgcggggcgagtttgcccattcgggattc
ccggagatatcttttgataagatgtccaccatcctcatagacaggggatacaaggtggct
cgcgtggagcaaacagagacaccagacatgatgaccgaacgctgcaagcgaatcaagccc
accaagttcgacaaggttgtggcccgtgaaatctgtcaaatcaccaatcgcggcactcag
gtctttggttcccagtgccagatcggaccgaatcatcaacctaattatatgctggccctg
gtcgagcaggacgagggcacttggagtcgctacggtgtgtgcttcatagacacctccatt
ggagatttccacctgggcgagtttgaggatgataaaaactgttcccggctgctgactctg
ctttcgcaccatatgcctgttttgctcctcaatgagaaatcctcgctgagtcaacgttct
cagcaaattgtgcgcacagttcttggtggcatcctcagggagcaactgcccagcaatgga
ccgcaaggctgcaatgccgagaagaccctcaagctcttggcagagcgttattacgccggc
aaggcagatggttccgatgacaactggcctctggtgctacgcaccatgcagtcggatttg
gatcacttgggtctcacgccgaatgaggattacaagctagccctgaaggcccttggtcag
tgcatatttttcatacacaaatgcaagctggagccaaaggtactgcctatggcgcgatat
cagctctatgtgccgcccgatcaaatagcagaggatgccaggcaggatattaagccaagg
gcctccaccttgaggcgttcccacatggtgctagatgccacaacgctgtccaatctgcgg
attattggtgaggatcactccctgctatctacgttggaccattgctgcaccaagttcggt
aagcgtctgctccaccactggctatgtgctcccagctgtgatgtggctgtgatcgaagag
cgtcaagaggccgttggagagctgatccgcatgtccagtgagctgcaggagatgcgagcc
ctgctagcacccatgccagattttgagcggaatctggcacagattcacctgtttggcaat
aagcaaatcaaggatatgaatcatcccgattcccgggccattctcttcgaggagaagctg
tacaacaagcagaagttgcgtggctttataagcgttcttaatggattcaaatcgcttacc
aagctgcccatgattttccatcaatgcgaatctgcacttctcaagaggatcacccagtta
cccgagtctggaggcacatttcccgatcttagcaaggaactaaagtactttgaaaccgcc
tttgatcacgaagcagcagccaagacaggtgtgattgccccacaagccggtatggatgcg
gagtacgactcggctatggatgccatagaggctatagaggggcgcctgaagacctatctg
gtggagcaggagcggcactttggctgccgcgtcacctactttggcagcgataagaagcgc
taccagttggatgtgccagaaactcatgccaacaaggccaacaaatcctattccttggag
ggacagaccaagggcaagaagccttcacgtcgctacaccacggctgagacacgagctttg
cttaaagatatgcagcacgcggaggatacacgaaatatggtgcttaaggacttggcgcgt
cgcctctttgaaaagttctccaatcattacgaacagtggaagcagtgcatcgattgtgtg
gccaatttggatgtcctcggctccctggcggagtatgccggacaacagattaccatttgt
gtgccagagctggtatctggcgcggatcagccattcatacaactggaagagggctatcat
ccgtgtgtaaatgcctccacatacatacccaatggcctggagttgggcactgaaaaggag
gcgcctctgtccctactcaccggtcccaatatgggcggtaagagtacactgatgagggag
ctggggttgctggttatcatggcgcaaattggagctcacattcccgctactagctgccgc
ctgtcgctggtggacagaatctttacgcgattgggcgcccaggatgacatcctagccggg
cacagtaccttcctcgtggagctgaatgaaacctcgctgattctcaagcatgccacctgc
cattcgctggtcctgcttgacgaactaggaaggggaacagccacctatgatggcactgcc
attgccgcctcggtggtcaacttcctggccaatctcaagtgtcgcactttgttctccacg
cattatcataatctgattgatttcttccacaacgacaagcggatcacactgggtcatatg
gcctgcatggtggagaacgaagacaatgcagatcccacccaagaaacggttacattcctc
tacaagtacacagccggtgcctgtcccaagtcgtatggcttcaatgcagccaagctggcg
ggcatgccacatggcatcatcaagcgtgcctatgagctttccaagaaagtggaagccata
gccttgcagcgcaagattacggcaaagattgtggccgcagcggcaggtaaagatgaggga
ttaaagaaggaaaaactaaatgttttaaaagatttgatgcagcagctaaaaatgtgtcat
gtttaa
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integrated database retrieval system
