Drosophila serrata: 110179814
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Entry
110179814 CDS
T06108
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dsr
Drosophila serrata
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsr03041
]
110179814
03016 Transfer RNA biogenesis [BR:
dsr03016
]
110179814
Enzymes [BR:
dsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110179814
Spliceosome [BR:
dsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110179814
Transfer RNA biogenesis [BR:
dsr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110179814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110179814
NCBI-ProteinID:
XP_020803078
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MTAFEEFGVLPELGKATDESDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLRDIEEGKGGKGGGGGAAGSVAPWTMSFYDRGNALAVTPDGLRCQSREFKEWH
GCRATTGVRGRGKFYYEATVTDEGLCRVGWSTQQANLDLGTCRMGFGFGGTGKKSNNRQF
DDYGGAFGKADVIGCLLDLERLEVSFTKNGQSLGVAFRIPDNLAKETFYPAVVLKNAEML
FNFGKTELKYPPGNGFVAVCQAGAEHSKANPLASPTASAVSATPAPNAPQAIIIEPSREL
AEQTYNQIEKFKYHLSNPEVNSVLLIGGVRLEEQKSQLMQGAHIVVGTPGRLEEMINSGL
VLLTHCRFFVLDEADGLLKSGYTELINRLHKQIPKITTDGRRLQMIVCSATLHDFEVKKM
AERLMHFPTWVDLKGEDAVPETVHHVVCLVDPKADTRWQSLRQAIPTDGIHDRDNVHPDN
QSEETYSQAVKLLKGEYCIHAIDKHKMDRALIFCRTKQDCDNLEKYFRQRGGQRYSCVCL
HGDRKPQERKQNLEMFKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKANYVHRIGR
VGRAERMGLAISLVSTVPEKVWYHGEWCKTRGRNCYNTNLTNVRGCCIWYNEPNLLAEVE
DHLNITIQQVDSAMDVPVNDFDGKVVYGQKNLSMGSGYEDHVEQLVPTVRKLTDLELQSQ
SLFLKRLKV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattcgaggagttcggcgtgctcccggagctgggaaaagccactgacgaatcg
gattggacccttcccactgatgtccaggcagaggccattcccctgatcctgggcggcggt
gatgtgttgatggccgcggagactggttcgggaaagacgggcgccttctgtcttcccatt
ctgcagattgtttgggagacgttgcgggacatcgaggaggggaaaggtggcaagggcggc
ggcgggggagcggctggttcggtggctccttggaccatgtccttttatgatcgtggtaac
gctttggccgtcacacccgatggtttgcgctgccagtcgcgagagttcaaagaatggcac
ggatgccgcgccactaccggagtccgcggccggggcaagttctactacgaggccacagtc
acagacgagggcctgtgccgcgttggctggtccacgcagcaagcgaacctcgatctgggc
acctgccgcatgggcttcggattcggcggcaccggcaagaagtctaacaaccgccagttt
gatgactacggcggggccttcggcaaggccgacgtcatcggttgcctgttggacttggag
cgtctggaggtcagcttcaccaagaacggtcagagcctgggtgtggccttccgcataccg
gataacctcgccaaggaaacattctacccagccgtggtcctcaaaaacgccgaaatgctg
ttcaactttggcaagactgagctcaagtacccgccgggcaacggattcgtggccgtctgc
caggctggagcggagcacagcaaagccaatccgctggctagtccgacagccagcgccgtc
tccgccactccggcgcccaatgctccccaggccatcatcattgaacccagccgagaactg
gccgagcagacctacaaccagatcgaaaagttcaagtaccatctgagcaatcccgaggtt
aattcggtgctccttatcggaggtgtgcgtctggaggagcaaaagagtcagctgatgcag
ggcgcccacattgtagttggcacgccaggacgcttggaggagatgatcaacagcggccta
gtgctcctaacccattgccgcttcttcgtgctggacgaggcagacggtctgctcaagagt
ggctacacggagctgatcaaccgccttcacaagcagatacccaagatcacgacggacgga
cgccgtttgcagatgatcgtctgttcggccacactgcacgacttcgaggtgaagaagatg
gccgagcgccttatgcacttccccacttgggtggacctcaagggcgaagatgccgtcccg
gagacggtgcaccatgtggtatgcctggttgacccgaaggcggatacccgctggcagtcg
ctgcgccaagccatccccaccgatggcattcacgaccgagataacgtccatcccgataat
caatcagaggagacatattcccaggcggtgaaactgctaaagggagagtactgcatccac
gccatagataagcacaagatggaccgtgccctcatcttctgccgcaccaagcaggattgc
gataatctggagaagtatttccggcagcgcggcggccagcgctactcgtgcgtctgcctc
cacggcgaccggaagccacaggagcgcaagcagaacctggagatgttcaagcgtcagcag
gtcaagttccttatctgcacagatgtggcggctcgcggtctggatatcaccggtttgccc
ttcatgatcaacgtgacgttgcccgacgacaaggccaactacgtgcatcgcattggacgc
gtgggccgagccgagcgcatgggtctggccatcagcctggtgtccacggtgccggaaaag
gtctggtatcacggcgagtggtgcaagacccgcggccgcaattgttacaacaccaacctg
accaatgtccgtggctgctgcatctggtacaacgagccgaacttgttggccgaggttgag
gaccacctgaacatcaccatccagcaggtggacagcgccatggacgtgcccgtcaatgac
tttgatggcaaggtggtgtacggccagaagaacctcagcatggggagcggctacgaggac
catgtggagcagctggtgcccaccgttcgcaaactaaccgatctggagttgcaatcacaa
tctttatttttgaaacgccttaaagtctag
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