Drosophila serrata: 110182111
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Entry
110182111 CDS
T06108
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
dsr
Drosophila serrata
Pathway
dsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110182111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsr03019
]
110182111
Messenger RNA biogenesis [BR:
dsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110182111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
zf-DNA_Pol
Motif
Other DBs
NCBI-GeneID:
110182111
NCBI-ProteinID:
XP_020805779
LinkDB
All DBs
Position
Unknown
AA seq
1883 aa
AA seq
DB search
MPAVEKSVITDWKRLWQMVSGIHYETPQETVRDELMNVASELQAGVLQFKPKSASDVQLD
TLLKEKKQEKLLPFTERLQDLLDLESAQCWEILCYYLTKEYRGSASLLTQLISTETNMAK
LHEDIRHYYSLERMIVLKIVKNLLVFHRVPNHPYHQEYRAIVDKITLPCLRDSYLMQLES
LISELPPRKLRAGECFYSADKLIAWSERNAREINEVLHILLLLNEHLPMGFEQIKRIFAA
CKQHSFGRLQNYLDDSQRYHQELIISITYSELVLIMKCLDFEKPHENTELIEKLIEDLHI
DISNMHHRQEHGPLLLVWMLLRLRGTNDADDASSLLRCRQLGKRAVDLKCFVQLQQIVRH
SMYADDSMLSRIARKTIYNQLCYMCDLFDGDGSCARHEGIYELLCELVSWPQLAKDFCNR
EDDDGARSLYKSLLENFPLEFTHLAKLSQSLTKAGQGNFIKSQLESLPILALLYDENEHR
LREVDTDEFELTASVRPFPRIDYTIPAGTSCTAIQHPSGCYMHFRTQVNFFDALHHEINC
LLQETGHLHGDFDSSERIRRVEAGLRYLETAVQQCTSIAGISAEMVHPTEMCVDLLHKFK
GVQCPPVGLISSCLNVCTALLPLVDEEIFSRISQLHILPTISQGLQYDFKHYANASGVCF
ESRFLGSVIDNVEKKSERYEFLLSYLGFLRTYTKLNRNRYMQVEIPGLIFLLRDVFPHLH
AWHFRSQVERNKIYFEVLSFICDVLDLTGANASDAHNEQRDLLLKICIYSLLNLDNGLIL
LRFVGVGNAYVQYTMELETNWMQQQPHGLMMLVRLSMRILMQLLRLKEKVYGSGESLSPL
EALIYTQPKQRDTLRIIPTVCSYMANIFDRWLPILSCRLLKRIALEFNMSLLACLDMEAD
QIRLTFMQKLPDELESDSIKLAILELVDACIAKQPGVTEAFFKVNYAQDKRSRSFFGKEC
VPNIGESIVTYMREFLDALQLEPLTIQQELPCKIMNIFHSLWKHNLQMLVDELVKDNQFW
PKIASPLFCELQPNVKIYTQLLNIISIEVYTGNGKNSALLDMMTKFFQLKTFEPWLKYVF
DMPKVPAVSTIGSSDDLPNWICCLQAFKDLIVILLKKQPKFMTIPELQFKVMAEKCLTVL
VDRSNYLEDMRPFIVLSELYVFLLLHFKHSYTKSGEEEQELMEQLLQLMSRICTCYDDLH
VRAKEACLAIITKCAHLYTGLLIRDSSIALRFLNSVVSIICSELQHMENSVSLEKTQSLN
TSDSSGGSKASTNSLILCLNLLKAVATIFHNDGPGNWDLPFVSVRLFQRLLRCISHTLPL
YSKQVLSVQLLDVLIVFAKGHCSVEFLHCDVGESLWLNLLPPRELLQSKMEFSKPSPADA
DRWTVEQWWPVYARGIELVTIILEKHKKCFLHEALQFVGIHEVYLVDALLLSKQSLEPAA
MQLIKAAISLVSCLTEHHKEWQEEYDSSVGNIMRAVQGLLCHSSSLFHQQRNLKCLLAGR
RSQLEILRSTEALTIDDDLITACNDLTDIIIYCVKSLLRFSPDLMDLLCGSVYEPHKWHP
LLDVKFGAPKLNEDNVTLTFGMVLNMVNIYVKALNMQNHGFSDVPLNTLPNVEKPATDPA
DIEDATICLSNQTNRTFSKSLSSVSISTAGCPASELLSNMDSQLCLLALEHLLLLVASQV
ICIIRSPELEPRWKTIVRRDISNELVIFHEFVRRKVIANYKENRSPWLRRKQGLFKLKFL
DPARISSSPSTSSRNLDPVRRIGSATNELRVNVVRRQHLQQQLRSPPPNTFDMSVDISTI
SPLQGTPNAAMLSPTESRDSRKRLYPAEQVGAAFVEDELASIDQQFFPPPTENGFSELSQ
VQLVEEDYMQLMSVLFNVMPHCE
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcggtggaaaaaagcgtgatcaccgattggaagcgcctgtggcagatggtgtcc
ggaattcactacgagacacctcaggaaacagtgcgtgatgagctgatgaatgtggccagc
gaactgcaggccggcgtgctccaattcaagcccaaaagcgcctccgacgtgcagttggac
acgctgctcaaggaaaagaagcaggagaaactgttgcccttcaccgagcgcctgcaagat
ctgctggatctggaatccgcgcaatgctgggagatcctgtgttactacctcaccaaggaa
tatagaggttccgcgagcctgctcacccagctgatctccacggagacaaacatggccaag
ttgcacgaggacatacggcactactactcgctggagcgcatgatcgtgctgaaaatcgtg
aaaaacctgctcgtgttccaccgggtgccgaatcacccctaccaccaggagtaccgggcg
atagtggacaagataactctgccctgcctgagggattcctatctgatgcagctggagagc
ctgatcagtgagctaccaccgagaaagctgagggcgggcgagtgcttctactctgcggac
aagctcattgcatggtcggagcggaatgccagggagatcaacgaggtgttgcacatcctg
ctgctgctgaacgagcatctgccaatgggctttgaacaaattaagcggatcttcgcagcc
tgcaagcagcactcgtttggcaggttacagaattacctggacgacagccagcgctaccac
caagagcttatcatcagtatcacgtattcggagctggtgctcatcatgaagtgcttggac
tttgagaagccacacgagaacacggaactgattgagaaactcattgaggatctacatatt
gacatttcgaacatgcaccatcggcaagagcacggtccattgctcctcgtctggatgctg
ctccgactgcgaggcaccaacgatgccgatgatgcttccagcctgctacggtgccgacag
ctcggcaaacgggcagtggatctcaagtgctttgtccagctacagcaaattgtccggcat
tccatgtacgcagacgattccatgctgtcgcggattgcccgaaagaccatctacaaccag
ctgtgctacatgtgcgatctgttcgatggcgatggcagctgtgcccggcacgaaggcatc
tacgagttgctctgcgaactggtttcgtggccgcagttggccaaggacttctgcaaccgc
gaagacgatgatggagcacggtcactgtataaaagtctattggagaattttcccttggaa
ttcactcatttggccaaactatcacagtcgctgaccaaagcggggcagggaaattttatt
aagagtcaactggaatcattgcccatactagctctcttgtacgatgaaaacgagcatagg
ctccgcgaggtggacaccgatgagttcgagcttacggccagtgtgcgtccatttccccgc
atcgattacaccattcccgctggcaccagctgcactgccatccagcatccctccggctgc
tacatgcacttccgcacgcaggtgaacttctttgatgctctacaccatgagatcaactgc
ttgttgcaagaaactggacacctgcacggggactttgactccagtgaacggattcgccgc
gtggaagccggcctgcggtacctggagaccgccgtacagcaatgcacatcgatcgccggc
atcagtgccgagatggtgcaccctaccgaaatgtgcgtggacctgttgcacaagttcaag
ggtgtgcagtgtccaccagtgggtctcatctccagttgcctgaacgtctgcaccgctctg
ctgccgctggtggatgaggaaatcttttcgcgaattagccagctgcacattttgcccaca
attagccaaggactgcaatatgatttcaagcattatgccaatgccagtggcgtgtgcttc
gagtctcgtttccttggctccgtgatcgacaatgtggagaagaagagtgagcgatacgag
ttcctgctgtcttacctggggttcctgcgcacctacacgaagctgaatcgaaaccgctac
atgcaggtggagattccgggattgatattcctgctaagggacgtctttcctcacttgcat
gcttggcactttcggtcgcaggtggagcggaataagatctacttcgaggtactgagcttt
atctgcgacgttctggacttaaccggcgcgaatgctagtgacgcccataacgaacagcga
gatctactgctgaagatatgcatttattcactgcttaatttggataatggcctgatcctt
ctaagatttgtgggcgtgggtaatgcctatgtgcagtataccatggagctagaaacgaat
tggatgcagcaacagccacacggcctgatgatgctggtacgtctgtccatgcgcatccta
atgcagctactgcggctcaaggagaaggtctacgggagcggtgagtccctgtctcctttg
gaggcgttgatatacacacagcccaagcagagggataccctgcggattatcccaactgtc
tgcagttatatggccaatatttttgaccgatggctgcctatactgtcctgccgcctacta
aaacgcatcgccctggagtttaacatgtcgctgctggcctgcctggacatggaggcggat
cagattcgattgacatttatgcaaaaactgcccgacgaactcgagagcgactcgatcaag
ctggccatcctggagctggtcgacgcctgcatcgccaagcagccgggtgtgactgaggcc
ttctttaaggtgaactatgcacaggacaagcgatcgcgttccttctttggcaaagagtgc
gttcccaatatcggcgagagcattgtcacctacatgcgggagttcttggacgccctccag
ttggaacccttgactatccagcaggagttaccctgcaagatcatgaacatattccactcg
ctgtggaagcacaatctccagatgctggtcgacgagctggtaaaggacaatcaattttgg
ccaaagatagcctctcccttgttctgcgaacttcaaccaaacgtgaaaatctacacacag
cttcttaacattatctccattgaggtctatacaggcaacggaaagaattccgctctcctg
gacatgatgaccaagttcttccagctcaagacctttgagccctggctaaaatacgtcttc
gacatgcccaaggtgccggctgtgagtactattgggtcgtccgatgacctgcccaactgg
atctgctgcctgcaggcgttcaaggacctcattgtgatcctgctaaagaagcagcccaag
ttcatgacgatacccgagttgcagttcaaggtgatggccgagaagtgcttgacagtgctg
gtggatcgctcgaattatctggaagatatgcggcccttcattgtgctttccgagctgtat
gtgttccttctgcttcatttcaagcactcgtacacaaaaagcggggaggaggagcaggag
cttatggaacagctgctgcagttaatgagccgcatttgcacctgctacgacgacctgcac
gtgagggccaaggaagcctgcctggccatcatcaccaagtgcgcgcacctctacacgggt
ctgctgattcgtgactcatccattgcccttcgcttcctcaattccgtggtcagcatcata
tgcagcgagctgcagcacatggagaactcggtgagcttggagaagacacaaagtctgaac
acttcggatagttcgggaggcagcaaggcgtccaccaactcgctgattctgtgcctcaat
ctgctcaaagccgtagccaccatattccacaatgacggccccgggaactgggatctgccg
tttgtttcggttcgcctgttccaacgacttctgcgctgcatatcccacaccttgccgctg
tacagtaagcaagtgcttagtgtccagctcttggacgtgctcatcgttttcgccaaagga
cactgctccgtggagttcttgcattgcgatgtgggcgaatccttgtggttgaatctactt
ccgccgcgagagctgctgcagtccaagatggagttcagtaagccctcgccggcggatgcc
gaccgctggaccgtggaacaatggtggcctgtatacgcgaggggcatcgagctggttacc
attatcctagagaagcataaaaagtgcttcctccacgaagctctccagttcgtgggcatt
catgaggtctacttggttgatgcccttttgctgagcaaacaatctttggagccagcagct
atgcagcttatcaaggcggccataagcttggtgtcctgtctgacggagcatcataaggag
tggcaggaggaatacgactcgtcggtgggaaatataatgcgagcagttcagggcttgttg
tgccatagctcctctttgttccatcagcaaaggaacttgaagtgtctcctggctggtcga
cgctcgcagctggagatcctgcgcagcacagaggctttgaccatcgatgatgatcttatc
accgcctgcaatgacctcacggacatcataatttactgcgtaaaatccctgttgaggttc
agtccggacctaatggacctgctttgcggcagtgtctatgaaccacacaaatggcatccc
ttgctggatgtaaagttcggtgcccccaagttgaacgaagacaatgtgacgctgacattt
ggaatggttctcaacatggtcaacatatacgttaaggccttgaatatgcaaaaccatggc
ttcagcgatgtccccttgaacaccttgccaaatgtagagaagccggcaactgacccagcg
gacatcgaagatgccaccatttgtctaagcaatcagacaaatcgcaccttctccaagtcc
ctgtccagcgtttcaatttccaccgcgggctgcccagccagtgagttgctctcgaatatg
gacagccagctgtgtctgctggcgctggagcatttgctcttgttggtagcatcgcaggtc
atttgcattatccgctcgccggaactggagccgcgttggaagacaatcgtgcgaagagac
ataagcaacgagttggtgatctttcacgagttcgtgcgtcgcaaggtgattgccaattac
aaggagaatcgcagtccatggctgcgacgcaagcagggacttttcaagctcaaattcctt
gatccagcgaggatttctagttcgccgagtacatcatcccgcaatctcgatccagtgcgt
cgcattggcagtgccaccaacgagcttcgggtgaatgtggttcggcggcagcacctgcag
caacagcttcgcagtccgccgcccaatacctttgacatgagcgtcgatatcagtaccata
tcgccgctgcaaggtactccgaatgctgccatgttgtcgccaacagagtcaagggacagc
cgaaagcgtttatatcctgcagaacaagtgggtgctgccttcgtggaggacgaactggca
tccattgatcagcagttcttccctccacccacggagaacggatttagcgagctgtcgcag
gtgcagctggtggaggaggactacatgcagctgatgtcggtcctcttcaacgtgatgccc
cattgcgagtga
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integrated database retrieval system
