Drosophila serrata: 110185239
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Entry
110185239 CDS
T06108
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
dsr
Drosophila serrata
Pathway
dsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110185239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsr03041
]
110185239
Spliceosome [BR:
dsr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110185239
Complex C
U5 SnRNP specific factors
110185239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
FAT
Motif
Other DBs
NCBI-GeneID:
110185239
NCBI-ProteinID:
XP_020809634
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MSNITAAVIANRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPP
ATKRKKKDEEEEEDEDLNDSNYDEFSGYSGSLFSKDPYDKDDERRMPSRFDRQRMDEKRK
EYRDRRLREDLERYRQERPKIQQQFSDLKRSLASVTSEEWSTIPEVGDSXNRKQRNPRXE
KFTPLPDSVLSRSLGGESSSTLDPSSGLASMVPGVATPGMLTPTGDLDLRKIGQARNTLM
NXKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPA
WIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLWLEAARLQPPDTAKAVIAQAARHIPT
SVRIWIKAADLETETKXKRRVFRKALEHIPNSVRLWKAAVELENPDDARILLSRAVECCN
TSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANGNIHMVEKIIDRSL
TSLTVNGVEINRDHWFQEAIESEKSGAVNCCQAIVKAVIGIGVEEEDRKQTWIDDADFCA
KENAFECARAVFAHALQVFPSKKSIWLRAAYFEKNHGTRESLEALLQRAVAIVPXSEILW
LMGAKSKWMAGDVPAARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKARGS
APTPRVMMKSARLEWALERFDEXLRLLEEAVEVFPISQTWMMKGQIEEQQRRTDDAAATY
TWAXKVPNSIPLWILSANLEERKGVLTKARSILERGRLRNPRXAVLWLEAIRXELRAGLK
EIASTMMARALQECPNAGXLWAEAIFMETKPQRKTKSVDALKKCEHDPHVLLAVSKLFWS
EHKFSKCRDWFNRTVKIDPDLGDAWAYFYKFELLHGTEQQQKEVLDRCIAAEPTHGESWC
RVSKNIQNWQFKTPETLRAVVRELSIPI
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacataacggcagcggtaatagccaaccgtaataagaagcatttcctgggcgtt
cccgctcctttgggctatgtggccggtgttggtcgcggagccactggcttcaccacccga
tcggatattggtccagcccgtgatgccaacgatgtgtccgacgatcggcacgctccgccg
gccaccaaacgtaagaaaaaagacgaagaagaagaggaggacgaagacttgaacgactca
aactatgacgagtttagtggttacagcggctccctgttctccaaggatccgtacgacaag
gatgacgagaggcggatgccatctagattcgatagacaacgcatggatgagaagcgtaag
gagtatcgtgacaggaggctgcgtgaggatctggagcgttatcgccaggagcgaccaaag
atccagcagcaatttagtgacctcaaacgctccctggccagcgtcacttcagaggaatgg
tccaccataccagaggtaggtgacagtncgaaccgaaagcaaaggaatccccggncggag
aagtttactcccttgccggacagtgtgctatcgaggagtctgggcggcgaatcatcctcc
acgttggatccctcgtctggcttagcctctatggtacctggagtagccacaccaggcatg
ctaacacccacaggagatttggatttgcgaaagattggccaggctcgtaataccctgatg
aatngtaagttatcacaggtttctgattccgtaactggccaaacggtggtggatcccaag
ggctacctcaccgacctgcagagtatgattcccacctatggcggcgatatcaatgatatt
aagaaggcccgcttgctgctgaagagtgttcgggaaacgaatcccaaccatccgcccgct
tggatagcctctgcccggttggaggaggtcactggcaaggttcagatggcaagaaatcta
ataatgcgaggttgcgaaatgaatccccagtcggaggatctttggctggaggcagcacgc
cttcagcccccggatacggcaaaggcggtcatagcacaagctgctcgtcatattccaacg
tctgttagaatttggataaaggctgccgatttggagacagaaacaaagnccaagcgccgc
gtatttcgcaaggctttggagcacatccctaactctgtccgtctgtggaaagccgccgtg
gagctggagaatccagatgatgcccgcattctactttcccgagctgtggaatgctgtaac
accagtgtggaactctggttggcccttgcccgtttggaaacctacgaaaatgcccgaaag
gttttaaacaaagcacgtgagaatataccaacggatcggcagatttggacaacagctgcc
aagctagaggaagccaatggaaacattcacatggtggagaaaatcattgatcgttcgctg
acttcgcttaccgtcaatggggtggaaatcaatcgcgatcactggttccaggaggccatc
gagtcggagaaatcgggagccgtcaactgctgtcaggccattgtgaaggcagtaattggc
ataggagtagaggaggaggatcgcaagcagacttggattgatgatgcggacttttgcgcc
aaggagaatgcttttgaatgtgcccgggcagtcttcgctcatgccctccaggtgtttccc
tccaagaagagtatttggctacgagctgcttatttcgagaagaaccacggcacacgcgaa
tccctggaagcattgctgcaacgtgccgttgccattgtcccannatcagagatcctatgg
ctgatgggcgcgaaatccaaatggatggccggtgatgtgcctgcggcaagagggattctc
tcgttggccttccaggccaatcccaattctgaggacatttggttggctgccgttaagctg
gagtcggagaattcagaatacgaacgtgcgcggcgtttgctagccaaggccagaggatcg
gctcccacgccaagagtgatgatgaagtcagctcgtttggaatgggcgttggagcgattt
gatgaangcctgcggttgcttgaagaggctgtggaagtattcccgatttcccaaacttgg
atgatgaagggtcagattgaggagcaacagcggcgaacggatgatgcggctgccacctac
acctgggcctaaaaagtgcccaactccattccgctgtggattttgtctgcgaatctggag
gagcgcaagggagtgttgaccaaggcgcgttccatcctcgagcgaggtcgtttgcgcaat
ccaaggnntgctgttctatggctggaggccatacggngtgaactgcgtgcaggtctcaag
gagatagccagcaccatgatggctcgagcactgcaggaatgccccaatgcgggannactc
tgggcagaggccatctttatggaaacgaaacctcagcgcaagaccaagtctgtggatgcg
ctcaagaagtgcgagcacgatccccatgtgctgttggctgtgtcgaagcttttctggtcg
gaacacaagttctcaaagtgcagggattggttcaatcgaacggttaaaattgatccagat
ctaggtgatgcttgggcgtatttttacaagtttgaattgcttcacggcacggagcagcaa
cagaaggaagtcctggatcgctgtattgccgcagaaccaacgcacggcgagtcatggtgt
cgcgtcagcaagaacatccaaaattggcagttcaaaacaccggagacgctgcgcgctgtt
gtccgggaactgtccatccctatctaa
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