Drosophila serrata: 110186170
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Entry
110186170 CDS
T06108
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
dsr
Drosophila serrata
Pathway
dsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110186170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsr03019
]
110186170
Messenger RNA biogenesis [BR:
dsr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
110186170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
CSD2
Rrp44_S1
OB_HELZ2
UPA_2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
110186170
NCBI-ProteinID:
XP_020810883
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSDLCQQCFQNEVYQLTSQHEIQSSLFKF
PHYIVLDTNVVLDQIDVLEEDVLHNVIVLTTVLNEVKHKSSSIYKRFNELVHDRTRNFYV
FVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLRASQSSKGFERSGRAATRVILL
TDDAGNRAKAEAEGILVASASEYVKSLDDFPLLVDKLSRNTFENEKKGLPQYPPHLSMKE
LLEGLRNKKLLQGAFQASRENYLEGSVNVEGYEKGILIQGREALNRAVDGDLVAVELLPE
NEWSAPSEIVLEEKNVYADDVPSEERAADEKDMLKQVQAAAASAERTPTGRIVGIVRRKW
RQYCGILQPSLIEDTNRHIFVPADRKIPRIRIETRQAAMLQNQRIIVTIDTWPRNSRYPH
GHFVRSLGPLGNMATENEVILLEHDVPHCKFSEEVLSFLPKLPWIITEEDYAKRVDLRDL
YICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLV
GKRIDMVPELLSSNLCSLVGGVGRFAFSCVWEVDQEANVLAKRFHKSVIKSKKAMTYEEA
QVIIDDPTQNDEIAKSLRNLNRLAKILKKRRMDNGALVLASPEIRFQVDSETHEPLEVEA
KQMRETNSMVEEFMLLANITVADHIASEFSECAVLRRHPRPPPTNFDPLVKSARYQGYHV
DIESGLALSHSLDKCVKKDNPYFNTMIRILTTRCMMQAVYFISGSLQKEEFFHYGLAAPI
YTHFTSPIRRYSDIMVHRLLAASIGADSTYAQLLERKSNEEICHNLNYRHKMAQYAGRAS
VALNTHLFFRGKEEDEEGYVLFVRKNALQVLIPKYGLEGTLYLKSDKDGKSGLERTKSEI
VFTFNEEDYTQRCGNVVFHSFDPVTVRLSLDSSNVQHEKLVFRLVKPYIKGFSVETTEDK
QTADAAPPSKKTKKDKKKK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactttacgcgaatttacgcgtaaaaccaagcgcgggaacatcctgaagattgtg
cgagagcactacctgcgggacgacattggctgcggctccgatctgtgtcagcaatgcttt
cagaacgaggtgtatcaacttacttcccagcatgagatccagagcagtctcttcaagttt
ccccactacattgtcttggacaccaatgtggtcctcgaccagatcgatgtactggaggag
gatgtgctccacaacgtgattgtcctcaccacagtcctcaacgaggtgaagcacaagagc
tcctccatttataagcgcttcaatgagctcgtccacgatcgcaccaggaacttctatgtg
tttgtcaacgagcaccacaaggaaacctatgctgaccgagagccggatgagaccgccaac
gatcgtaatgaccgtgccattcgcctggccaccaagtggtatgacgaccacctgcgggct
tcgcagtcctccaaaggattcgagcgtagtggtcgggctgctacccgggtaatcctgctt
accgatgatgccggaaaccgtgccaaggccgaagccgagggcattctagtggcctctgct
tcggagtatgtgaaatccctggacgacttcccactgctggtggataaactttcgcgcaac
actttcgagaatgagaagaagggtctgccccagtatccgccgcatttaagcatgaaggag
cttctggagggactgcggaacaagaagctgttgcagggcgctttccaggcctccagggag
aactacctcgagggtagtgtcaacgtggaagggtacgagaaagggattttaatccaagga
agggaggcgcttaaccgagccgtggacggcgatctggtggctgtggagctgctgcccgag
aatgaatggtcggcgcccagcgagattgttctggaggagaagaacgtatatgctgatgat
gtgcccagcgaggagcgtgccgctgacgaaaaggacatgctaaagcaggtgcaggctgca
gccgcttctgcagaacgcacacccaccggccgcatcgtgggcattgtgcgacgcaaatgg
cgccaatactgtggcattctgcagcccagcctcattgaggacaccaacagacacatcttt
gtgcccgccgatcggaagataccccgcatccgcattgagacccgtcaggcggccatgctg
cagaaccagcgcatcattgtaaccattgacacgtggccaaggaactcccgctatccgcac
ggacactttgtacgctccctgggcccattgggcaacatggccaccgagaacgaggtaatc
ctattggagcacgatgtgccacactgcaagttctcggaggaggtgttgagcttcctgccc
aaattgccatggatcattaccgaggaggattacgccaagcgtgtggatctgcgcgatctg
tacatttgttcagtggacccgccaggctgcacagacattgacgatgccctgcattgtcgg
gagcttcccaatggcaatctggaggtgggtgtccacatcgccgatgtgagtcactttatt
cgacccggcaacgccctggataaggaggcagctgccagaggaaccactgtgtatctggta
ggcaagcgcattgacatggtccctgagcttctcagctcgaatctgtgctcgttggttgga
ggtgtggggcgtttcgccttttcctgtgtgtgggaggtggaccaggaggcgaatgtgttg
gccaagcgcttccacaagagtgttataaagtccaagaaagccatgacatatgaggaggcg
caggtgataatcgatgaccccactcagaatgatgaaatagccaagtccctgaggaatctc
aatcgtctggccaagatcctcaagaagcgacgcatggacaatggagccttggtgttggcc
tcgcctgagattcgcttccaggtggacagcgagacccacgaacccctcgaggtggaggcc
aagcagatgcgtgaaaccaattcaatggtggaggagttcatgttgctggccaacatcacg
gtggccgaccacattgcctcggaattctccgagtgtgccgttctgcgtcgccatccccga
ccgccgcctaccaactttgatccgctcgtgaagtccgcccgctatcagggctaccacgtg
gacatcgagtccggcttggcgctgtcgcattcgctggataagtgtgtcaaaaaggacaat
ccgtactttaacaccatgatacgcatcctcaccactcgctgcatgatgcaggcggtgtac
tttattagcggcagtttgcaaaaggaagagttcttccattacggactggcggcgcccatc
tacacgcattttacctcgcccattcgtcgttactctgatattatggttcaccgtctgctg
gctgcctccataggcgcggacagcacctatgcccagctgctggagcgcaagtccaacgag
gagatatgccacaatctgaactaccgccacaagatggctcagtatgcgggtcgggcctcg
gtggccctcaacacgcatctcttcttccgtggcaaggaggaagatgaagagggctatgtg
ctgtttgttcgtaagaatgcactgcaagtgctcatccccaagtacggtctcgagggaacc
ctgtatctgaaatccgacaaggatggcaagagcggtctagagcgtaccaagagcgaaatt
gtcttcacctttaacgaggaggactacacccagcgctgcggcaatgtggtcttccactct
ttcgacccagtcactgttcgtttgagtctggactccagcaatgtgcagcacgagaagttg
gtcttccggctggtcaagccgtacatcaaggggttcagtgtggaaacgacagaggataaa
cagacagcagacgcagcaccgccctcgaagaagacgaagaaggataaaaagaaaaagtaa
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