Drosophila serrata: 110186397 Help Entry 110186397         CDS       T06108                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism dsr  Drosophila serrata Pathway dsr03018   RNA degradation Brite KEGG Orthology (KO) [BR:dsr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     110186397  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dsr03019]     110186397 Enzymes [BR:dsr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      110186397 Messenger RNA biogenesis [BR:dsr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      110186397   mRNA degradation factors    3'-5' decay     Ski complex      110186397 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT DEAD Ski2_N MTR4_beta-barrel Helicase_C DEXQc_Suv3 ResIII MTR4-like_stalk RhopH3_C Motif Other DBs NCBI-GeneID:  110186397 NCBI-ProteinID:  XP_020811222 LinkDB All DBs Position Unknown AA seq 1197 aa AA seqDB search MSEIRGEDNLERLRNYILRPELSIHDPLPDVLPRKFDPMRLLHVPRGPGTTKLVPRRDQS GKILEFLEVDLEDVGANANNSMSMQREPGLLDEATRGSHSNYPFWPGGFDEQRQQIAALD VDNFMIGDKLLTVPPGFSSGHNFSQSEPVAPAPVLPDASNVDLLENLEQDLDVQEWMQLT RLPETGSSGVAQGAGEGNLPFPSEEFQDVDDQIMKADLKPVLNISTATKTFKSDWAEMVD ISHPINDFKEQIPCPAMEFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIAL SKRDLTRTIYTSPIKALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLY CGSEVTRDLEYVIFDEVHYINNPERGHVWEEVIILLPDHVNIIMLSATVPNTMELADWVG STKKRKVYVISTLKRPVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVERKKEM QGKAKGGGGASKNYVNAKQEQYTWIGLIDFLRRNNKMPVVAFTLSRNRCDANVAALQSVD LNTEKEKGSVQKFFLQCLAKLKPPDRTIPQVLALKDALERGIGVHHSGILPILKEIVEML FQNGLVKLLFATETFAMGVNMPARTVVFDSHKKFDGVEVRNLKPGEYIQMAGRAGRRGHD ETGTVILLCKANVPPSMELRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSF KEFNQKLQLPTQQKQLRLAEDKFAMLPTLGEHLKPLIEFYDKAVEYWKEKHRTMKFVVTQ AKIQKELKVGRVIVVTQGKHYNKLAILLNTKSVPGKDTVYKVLVLDHQFKAKDNDNLQRG ELYYKIISLTSNHKMFQPEGIGGHTVLDIKAIDIISITKNTFKVDADVIIRNWEQRQLER FKDTPPGGTVVKTVTELHQLNENYIANPDSVKFVNLSKEINVNADTEVAELNYVDHLFRQ VGDLLPHTNIAGFEQEFAKVYERRMLEIHIEELRFKNSAKNLSLYPDYCNKMDVLRALKY IDELNEVTLKGKVACEMGQNELLITELILCNMFNDLEPAEIAALLSGLVFQAKIQGEPVI PEPLKKCVAAFEQINDTILAEEQRYHAVIEAENRLNFGLIEVVYEWARNKPFAEIMKLTE VQEGIIVRCIQQLDETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLYTEL NT seq 3594 nt NT seq  +upstreamnt  +downstreamnt atgagcgagattaggggcgaggacaacctggagaggttgcgcaattacatcctgcgcccg gaactctccatccacgatcccctgccggacgtactgccacgcaaattcgatccgatgcgc ctgttgcatgtgccccgcggtcctgggactactaagttagttcctcgtcgcgaccagagc ggaaagattctggaattcctggaggtggacttggaggatgtgggggccaatgccaacaat tcgatgtccatgcagcgcgaaccgggtctgctagatgaggcgacgcgtggctcgcactca aactatcccttctggccaggcgggttcgacgagcagcggcaacagatcgcggcactggat gtggataactttatgatcggggacaagctgctcacagtgccaccgggcttttcgtccggt cacaacttctcccaatcggagcctgtggctccggcgcctgtactacccgacgccagcaac gtggatttgctggagaatctggaacaagatctagacgtgcaagagtggatgcagctgacg cgccttccggaaacgggctcttctggagtcgctcaaggtgccggagagggaaacctgccc tttccctccgaggagttccaggacgtcgatgaccagatcatgaaggcagaccttaagcca gtgctaaacatttccactgccacgaagaccttcaagagcgactgggccgagatggtggac atcagtcatcccatcaacgattttaaggagcagataccctgcccggctatggagtttccc ttcgagctggacgtctttcaaaagcaggcaattctcaagctcgagcagcgccagtatgtg ttcgtggcggcccatacctcggccggtaagacggtggtggccgaatacgccatcgcgttg tcaaaacgcgatctaacccgcaccatatacacgtccccgatcaaagctctgtccaatcag aagtatcgcgacttccgcaagactttcaaagacgttggactgattacgggggatctgcag atcgaaccaaccgcctcttgcctgattatgaccaccgagattctgcgctccatgctgtac tgtgggagtgaagtcaccagggacctggaatacgtcatcttcgacgaggtgcactacatc aataacccggaaagaggtcatgtgtgggaggaggtcatcattctactgccggaccacgta aacatcataatgctcagtgccacagtgcctaacaccatggagctggccgactgggttggc agcaccaagaagcgcaaggtgtatgttattagtactctaaaaaggcccgttcctctgact cactttctttacacgggagccggcggcaagagccgggacgatatcttcctgcttgtggac gctcaaggaaagtacctgcagggtaactacgagaaggccgtggagcgtaaaaaggaaatg cagggcaaggcgaaaggcggtggtggcgcttcaaagaactacgtgaacgccaagcaggag cagtacacctggatcggactaattgattttctgcggcgcaacaacaagatgccagtagtg gcctttaccctgtcccggaatcggtgcgacgccaacgttgcggccttgcagtcggtggat ctcaacacggagaaggagaagggttcagtgcaaaagttcttcctgcaatgccttgcgaag ctaaagcctccggatcgcaccattccacaggtgcttgccctcaaggacgccctagagcgg ggcatcggagtgcaccacagcggcatcctgccaatactcaaggagatcgtggaaatgctc ttccagaatggactggtgaagttgctctttgcaaccgagacatttgcaatgggcgtcaac atgccggctcgcacggttgtcttcgattcgcacaagaagttcgatggcgtcgaggtgcgc aatctgaaacccggagagtacattcagatggctggcagggcaggccggcgaggtcacgat gaaacgggcacggttattctgctgtgcaaggccaatgtgccgccatcgatggagttgcga cctatgatccttggcttacccgagaagctgcagtcacagttcattctgcgctatgcagtg atcctcacctgcctacgcatcgaaagcatcaaagtggaggacatcatgaagtttagcttc aaggagttcaaccaaaaactgcagctgcccacgcaacagaagcagctccgcctggcagag gacaagtttgccatgcttccgacccttggcgagcacctgaagccgctgattgaattctat gataaggctgtggagtactggaaggagaagcatcgtaccatgaaattcgttgtcacccaa gccaagatccagaaagagctgaaagtgggccgcgtcatcgtagtcacccagggaaagcac tacaacaagctggccatcctacttaacaccaagtccgttccaggcaaggacactgtatac aaagtactagtcctagaccaccagttcaaggcaaaggataatgataatttgcagcgaggc gagctctactacaaaattatctccctcacttctaatcataagatgttccagccggaggga attgggggacacactgtgttggacatcaaggcaattgatattattagcattaccaagaac acattcaaggtcgatgctgatgtgatcatccggaactgggagcagcggcagttagagcgc tttaaggacacaccgccaggtggaaccgtggtcaagactgtaaccgaactgcaccagctc aacgagaactacattgccaatccggattccgtcaagtttgtaaacctgtccaaggagatc aatgtgaacgcggatacggaagtggccgaacttaactatgtagatcacctgtttcggcaa gtgggcgacttgctaccgcacaccaacatagccggcttcgagcaggagttcgccaaggtc tatgagcgccgcatgctggagattcacatcgaggagctgcgcttcaagaattccgcaaag aacctctctctctatcctgactactgcaacaagatggacgtgcttcgagctctcaaatat atcgatgagctgaacgaggtgacactcaaaggcaaagtggcctgcgagatgggccaaaac gagcttctgatcacagagctcattctgtgcaacatgttcaatgatctcgaacccgctgag attgcggccctgctctctggccttgtcttccaggcgaaaatccagggcgagcctgttatt ccggagccgctgaagaagtgtgtagcagcttttgaacagatcaacgacacaattctggcc gaggagcagcgctaccatgcggtcatcgaggcagagaataggcttaacttcggcctgatc gaggtggtctacgagtgggcgagaaacaagccctttgctgagattatgaaactgaccgag gtgcaggagggcattatcgtgcggtgcatccagcagctggacgagacgctgcgtgatgta aaaacggctgccatacgaattggtaatcctggactgcagtctaaaatggaggaggcgtct gcggccatcaaacgcgatattgtgttcaccgcttctctgtatacggaactgtaa

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