Drosophila serrata: 110187406
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Entry
110187406 CDS
T06108
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dsr
Drosophila serrata
Pathway
dsr03013
Nucleocytoplasmic transport
dsr03015
mRNA surveillance pathway
dsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110187406
09122 Translation
03013 Nucleocytoplasmic transport
110187406
03015 mRNA surveillance pathway
110187406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsr03019
]
110187406
03041 Spliceosome [BR:
dsr03041
]
110187406
Enzymes [BR:
dsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110187406
Messenger RNA biogenesis [BR:
dsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110187406
Spliceosome [BR:
dsr03041
]
Complex C
Other components
EJC/TREX
110187406
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110187406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110187406
NCBI-ProteinID:
XP_020812453
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTAVETQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTR
ELAFQISKEYERFSKYMPTVKVAVFFGGLAIQKDEETLKSGTPHIVVGTPGRILALIRNK
KLNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCTAL
AQLLTEQNFPAIGIHRGMNQEERLNRYQQFKDFQKRILVATNXFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPAEIDLSTY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgacgatcttctcgactacgaggatgaggagcagaccgagaccacggcg
gtggagacacaggaggcgcccaagaaggacgtgaagggcacgtatgtgtccattcacagt
tccggcttccgtgacttcctgctcaagccggagatcctccgtgctattgttgattgcggc
ttcgagcatccctcggaggttcagcacgaatgcattccgcaggccgtcttgggcatggac
atcctctgccaggccaagtccggtatgggcaagacggctgtcttcgtgttggccacactc
cagcagctggagccatcggacaacaacacctgccatgttctggtcatgtgccacacccgt
gagctggctttccagatcagcaaggagtatgagcgcttctccaagtacatgccaacagtt
aaggttgccgtgttctttggtggtcttgccattcaaaaggatgaggagactctcaagagt
ggtactccgcacattgtggtgggaacccccggacgtattctagccctgatacgcaacaag
aaactgaatctgaagcatttgaagcactttgttctggacgaatgcgacaagatgttggag
caactggatatgcgtcgtgacgttcaagagattttccgtagcacaccgcatggaaagcaa
gtgatgatgttctctgccacattgagcaaggacattcgtccggtgtgcaagaaattcatg
caagatccaatggaggtctacgtggatgatgaggcgaagctgacgctgcacggactgcag
cagcactatgtcaacctgaaggagaatgagaagaacaagaagctcttcgaactgctcgat
gtgcttgagttcaatcaggtggtaatcttcgtcaagtctgtgcagcgctgcacggcgttg
gcccagctcctgacagaacaaaacttccccgctattggcatccatcgcggcatgaaccag
gaggagcgtttgaaccgctatcagcagttcaaggatttccagaagcgcattttggtggcc
accaacntttttggtcgcggcatggacattgagcgtgtaaacattgtcttcaactatgat
atgcccgaggactcggacacatatttgcatcgcgtggcccgtgctggacgcttcggtacc
aagggactggccattacatttgtttcggacgagaacgatgccaagatactcaacgaagta
caggatcgattcgatgtgaacattagcgagctgccggctgaaattgatctatccacatac
attgagggacgctaa
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integrated database retrieval system
