Drosophila serrata: 110188088
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Entry
110188088 CDS
T06108
Name
(RefSeq) LOW QUALITY PROTEIN: exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dsr
Drosophila serrata
Pathway
dsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110188088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsr03019
]
110188088
Messenger RNA biogenesis [BR:
dsr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
110188088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
110188088
NCBI-ProteinID:
XP_020813302
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MPRPPKRNNTENEAEKTKQEQPCDQSEDIADFTNQAFKNVVAATRASNAFPQGPTRSLYL
TYPGFARAMDNLSQRVVGLIGNVLHAKEVKDDIRKRALDEQFELVQECNDMIFERITTNL
DIKSGLRRNPQQVVEAQVDVISSNSSSAEASTGSSSQAETPKAGSWNKTTPQRNTFSARL
FTVKNIVRPQTQFKEPVDNSAQNPFCPRLKEKPNSLKPLALLAEYDEVGNIQSYLHPYEF
ELLKFEPPTEQLQKQKPILPSLMADTELMLVDTVEKLKVALEELSLAAQIAIDVEHHSYR
TFMGITCLVQMSTRSKDYIFDTLTLRDEMHILNQVLTDPKKLKILHGADLDIEWLQRDLS
LYIVNMFDTHRAAKALNMAKLSLAFLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQD
THFLIYVYERMTNDLLQQQAEPGLLNTVYQMSTDVCKKRYSKPHIGPESHLDLVRKTKRS
FDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLPREMQGILACCNPIPPL
VRQHLHALHQIVLKARDQPLIKPISEARSSTQASLPPSTKDFGSKLYCPHDFSHQEEVRD
DLPTLLKRSSVGKLQLVRQEVITKENLFVPPAMSLFDKPPKPTQEEELRWAHLRKESQML
RMPYKRYLAILPLMEKLKADQIARERSEQLKRRLCPTEPPPAQNIKLDAAPAVKEDVEDP
IYSLPLKEQLKRKHAANRKPDSADQQPTTSKRARKDENTHPIKLEHADSATKPAESDDEV
VETPIERQPAEEPKPPSRKEKRKEKRRQFQRRNRANHSQSSNQQVPQPKIKVQGGNFDYK
NVDFRQFKGGAQRARGTEIKQQMRGKNRPNNRNIKQFNKLFTFSNVKPEGKK
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtccgccgaaaagaaataacactgagaatgaggcggagaaaactaagcaggag
cagccgtgcgaccaatccgaagacatcgcggatttcacaaaccaagctttcaagaatgtc
gtggccgccacccgtgcatcgaatgcctttcctcagggccccacccgctccctgtatctc
acctatccggggtttgcacgtgccatggacaacctgtcccagcgtgtggtggggctgatc
gggaacgtactgcatgccaaggaagtcaaggacgacatcaggaaacgcgcactggacgag
cagtttgagctggtgcaggagtgcaatgacatgatatttgagcgtattaccacaaatttg
gacattaagagcggcctgcgcagaaatccacagcaagtggttgaggcccaggtggatgtc
attagtagcaactcttcatcagcagaagcatcaacaggtagctcatctcaagccgaaaca
ccgaaggcgggtagctggaataaaacgacaccacagcggaacacattttccgctcgcctt
tttacggtcaaaaatattgtgcgaccacaaacgcagtttaaggaaccagtggacaatagt
gcacagaatccgttttgtccacggctcaaagagaagcccaactcgctgaagccgctggca
ctgttggctgaatacgacgaagttggaaatattcagtcttatctgcacccatacgagttt
gagctgctgaagtttgaacccccaacggagcagctgcagaaacagaagccaatattgcca
tccctaatggccgacacagaactgatgctggtagacacggtggagaagctaaaagtagca
ttggaggagctgagtctggccgcgcagattgcgatcgatgtggagcaccactcgtaccgc
accttcatgggcattacttgccttgtccaaatgtccacacgctccaaggactatattttt
gatacccttaccctgcgggatgagatgcacatattgaatcaggtgctgacggatcctaag
aagctaaagatcctgcacggtgccgacttggacattgagtggctgcagcgtgacctatca
ttgtatattgtcaacatgttcgacacgcaccgggcagcgaaagccctaaacatggccaag
ttatcgttggcatttctgttgaaacactatctggatctggatgtggacaagagcctgcag
ctggccgattggcggatgcgaccattgcctcagcaattggtcgactatgcccgccaggat
actcacttcctcatttacgtttacgaacggatgaccaacgatctcctgcagcagcaggct
gagccgggtctgttgaataccgtatatcaaatgagcacggatgtgtgcaagaagcgatac
agtaagccccacatcgggccggaatcccacctggatttggtgcgaaagacgaagcgttca
tttgacaatcggcagctttatgctcttcgtgggatctttgagtggcgggatgcgacggcg
cggtccgaagacgagagttatggctacgtcttgcccaatcacatgatgcttcagatcgca
gagagcttgccgcgcgagatgcaaggcatcttggcttgctgcaatcccattccgccgttg
gtgcggcaacatctgcacgcgctccatcagatcgttctgaaggcacgcgatcagccgctg
atcaaaccaatttcggaggcccgcagcagcactcaggcatcattgccgccctccacaaaa
gatttcggcagcaaactctactgtccgcacgatttttcgcatcaggaggaggttcgtgac
gatctgcctacactgcttaaacgtagctccgtgggaaaactccagctggtccggcaagag
gttattaccaaggaaaatctatttgttccaccggcaatgtctctattcgacaagccaccg
aaacccactcaagaggaagaacttcgttgggcccatctgcgcaaggagagccagatgctt
cgcatgccctacaagcggtacttggccatcctgccattaatggaaaagctaaaggctgac
cagattgcccgggagcgtagtgaacagctcaaaaggcgtctgtgtccgacagaaccaccg
ccggcgcaaaatatcaaacttgatgccgcacctgctgtcaaagaagacgtggaggatccc
atttactccctgcctctcaaggaacaactcaaacgaaagcacgcagcaaatcgaaaacca
gactcagcggatcagcagccaaccaccagcaaaagagcacgaaaggatgagaatacacat
cccattaaacttgaacatgctgattcagctacaaaacccgccgaaagcgacgacgaggtc
gtggagacgcccattgaaagacaacccgctgaggagccgaaaccaccatccagaaaagaa
aaacgcaaagagaagcgcaggcaatttcagcgaaggaatcgagcaaatcattctcaaagc
tccaaccagcaggtgccgcagcccaagattaaggtccaaggcggcaactttgactacaag
aacgtggacttccggcagtttaagggcggagctcaaagagcccgcggcacggagatcaag
cagcaaatgcgcggaaagaaccgcccgaacaaccgcaacattaagcagtttaataagctc
tttacatttagcaatgtaaagccagaggggaaaaaataa
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