Drosophila serrata: 110189456
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Entry
110189456 CDS
T06108
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dsr
Drosophila serrata
Pathway
dsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110189456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsr03041
]
110189456
03009 Ribosome biogenesis [BR:
dsr03009
]
110189456
Enzymes [BR:
dsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110189456
Spliceosome [BR:
dsr03041
]
Complex A
U2 snRNP components
U2 related factors
110189456
Complex B
110189456
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110189456
Ribosome biogenesis [BR:
dsr03009
]
Eukaryotic type
90S particles
Helicases
110189456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
SRP54
ResIII
ABC_tran
ATPase
AAA_30
AAA_25
T2SSE
AAA_7
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
110189456
NCBI-ProteinID:
XP_020815189
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSKRRIEVGETYGSKAKKESEPSSSAAAAASAAGTVAQILGGFVPNKQPPTMNPLTNKPY
SQRYQNLYKKRISLPVFEYQADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVDFAVSKGR
KGVSCTQPRRVAAMSVAQRVSEEMDVNLGEEVGYSIRFEDCSSAKTLLKYMTDGMLLREA
MSDPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYFD
NAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEA
CKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEAAPPPNANGAIGRKVVVSTNIAE
TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLY
TEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY
LAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNE
AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLA
RIMDRFKLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPST
CLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLLSLAPQYYDLNNFPQCEAKRQLELLQQ
RMETKQYQKGF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgccgcatcgaagtgggggagacctatggcagcaaggccaagaaggagtcg
gagccatcatcctcggcggctgcagctgcttcggcggccggcacagtggcgcagatcctt
ggcggctttgtgccaaacaaacagccgcccacgatgaacccgctgaccaacaagccgtac
tcgcagcggtaccagaacctgtacaagaagcgcatctcgctgcccgtgttcgagtaccaa
gcggacttcatgcgcctgctcagccagcatcagtgtatcgtgctggtgggcgagacgggc
tctggcaaaacgacacagatcccgcaatggtgtgtggactttgcagtgtcaaagggccgt
aagggcgtgtcctgcacacagccccgccgagtggctgccatgtccgtggcacagcgcgtc
tctgaagagatggatgtgaacctgggcgaggaggtgggttactctatccgttttgaggac
tgctcttcggccaaaacgctgctgaagtatatgactgacggtatgctgttgcgcgaggct
atgtccgatccgatgctggagcaataccaggttatcttgctcgacgaagctcacgagcgc
accctggccaccgacattctgatgggcgtgctcaaggaggtgatccgccagcgtaatgac
ctcaagttggtggtgatgtccgccaccctggatgcgggcaagtttcaacagtatttcgac
aacgcaccgcttatgaacgtgcccggtcgcacgcatcccgtagagatattttacacgccg
gagcccgaaagggattacctagaggctgccattcgcacagttatccagatccacatgtgc
gaggagatcgagggcgacattctcatgtttcttacgggtcaggaggaaattgaagaggct
tgcaagcgtattaagcgcgaaattgacaatctcggatcggagataggcgagctgaagtgc
atccccctctactccacactgccgccgaacctgcagcagcgcatcttcgaggcggcccct
ccaccgaatgccaatggagctatcggacgcaaagtggtggtgtccaccaacatagctgag
acctcgctgaccatcgacggcgtggtgttcgtgattgacccgggctttgccaagcagaag
gtgtacaatcctcgcattcgcgtagagagtctgctcgtctcgcccatctccaaggcctcg
gctcagcaacgggctggtcgtgccggacgtacgcggccgggcaagtgcttccgtctttac
acagaaaaggctttcaagaacgaaatgcaggacaacacataccccgagattctgcgatcg
aatttgggtactgtggtcctgcaactgaagaagctaggcatcgatgatctggtgcatttt
gactttatggatcctccggctccagagactctgatgcgagccctcgagttacttaactat
ctggctgccctcgatgatgacggcaatctgacggaccttggagccgttatgtccgagttc
ccattggatccgcagttggctaaaatgctgattgccagctgccagcacaactgctcgaac
gagattctttctataacggccatgctgtcggttccacaatgcttcgtgcgtcccaacgag
gccaagaaggcagccgatgaggccaaaatgcggttcgctcacattgacggggatcacttg
accttgctgaatgtctatcacgctttcaagcagagcagcgaggatcccaactggtgctac
gagaacttcatcaactttcggtcgctgaagagcgcagacaatgtccgccagcagctggcc
agaatcatggacagatttaagttgcggcgcaccagcactgagttcacctcaaaggactac
tatgtgaatatacgcaaggccctcgtccaaggcttcttcatgcaggtagcccacctggag
cgtaccggccactacctgacgatcaaggacaaccagaatgtgcagctgcatccgtctacg
tgtctggaccacaagcctgactgggtcatctacaacgagtttgtcctgacgaccaagaac
tacattcgaaccgtgacggatgtcaagcctgaatggttgctcagtttagctccgcagtac
tacgacctgaacaactttccgcagtgcgaggccaagcgccaactggagttgttgcaacag
cgaatggaaactaagcaataccagaaaggtttctaa
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integrated database retrieval system
