Drosophila serrata: 110189582
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Entry
110189582 CDS
T06108
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dsr
Drosophila serrata
Pathway
dsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110189582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsr03019
]
110189582
03041 Spliceosome [BR:
dsr03041
]
110189582
Messenger RNA biogenesis [BR:
dsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110189582
Spliceosome [BR:
dsr03041
]
Complex B
Other components
Prp19-related factors
110189582
Complex C
110189582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
Mad3_BUB1_I
TPR_2
TPR_12
TPR_15
TPR_8
RPN7
PPR
ARM_TT21
TPR_10
TPR_9
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
110189582
NCBI-ProteinID:
XP_020815374
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MATKTDKSLNIEINFDEEDVPYEEEILRNAYSVKHWLRYIDHKAKAPNNGVNLVYERALK
ELPGSYKIWHNYLRTRRKQVRGKIPTDPMYEEVNSAFERALVFMHKMPRIWMDYGAFMTS
QCRVTRTRHVFDRALRALPITQHGRIWPLYLQFVRRFEMPETALRVYRRYLKLFPEDAEE
YVDYLQEAERLDEAAQQLAHIVDNEHFVSKHGKSNHQLWNELCDLISKNPHKVHSLNVDA
IIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF
EELSLNKRMEQVASNESATEEDDIDVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEWH
KRVTLYEDKPAEIISTYTEAVQTVQPKQAVGKLHTLWVEFAKFYEANGQVEDARVVFERG
TEVEYVKVEDLAAVWCEWAEMELRQQQFEAALKLMQRATATPKRKVAYHDDTETVQARLH
RSLKVWSMYADLEESFGTFKTCKAVYERIIDLKICTPQIIINYGMFLEEHNYFEEAYRAY
EKGIALFKWPNVYDIWNSYLSKFLERYGGTKLERARDLFEQCLDQCPAEHAKYFYLLYAK
LEEEHGLARHAMSVYDRATSAVKEDEMFDMYNIFVKKAAEIYGLPRTREIYEKAIEALPE
QHMRHMCVKFAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMAAQFLNTNNGTAADAGAGTDAMRQLEEKARQAAAEAKQKP
TEKAASNIMFVRGETQGGAKDKKDTVVNPDEIDIGDSDEDEEDDDDEAENEGANQENQAV
EAAATKTDDEGLVMKKLRFEQKAIPAKVFGSLKPTNQGDSDEE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaaacggataaatcactgaatatagagattaattttgatgaagaggacgtg
ccgtatgaagaggaaattcttcggaacgcttactccgtgaaacactggctgcgctacatt
gatcacaaggccaaggcgcccaataatggagtgaatctggtgtacgagcgggctctgaag
gagctccccggcagctacaagatctggcacaattacctgaggacccggaggaagcaggtg
cgtgggaaaatccccacggatcccatgtacgaggaggtgaacagcgcctttgagcgcgcc
cttgtcttcatgcacaaaatgccacgcatttggatggactatggcgcctttatgacctcc
caatgccgagtgacccgcacccgccacgtcttcgatcgggctctgagggcgctgcccatc
acgcagcacggcagaatttggccgctatatttgcagttcgtgcgccggtttgagatgccg
gaaacggcgcttcgtgtgtaccgccgttatctgaaactcttccccgaggatgctgaggag
tatgttgactatctgcaggaagcggaacggctggacgaagctgcccagcagttggctcac
attgttgacaacgagcactttgtgtccaagcacggcaagtccaaccatcagctgtggaat
gaactgtgcgacctcatctccaagaatccgcacaaggtgcactccctcaacgtggacgcc
atcatccgcggcggcctgaggcgttacaccgaccaactgggccacctgtggaactccttg
gcggactactacgtccgttcgggtttattcgatcgcgccagagatatctacgaggaggcc
atccaaacggtgacaactgtgagagatttcacccaagtcttcgacgagtacgcccagttt
gaggagctttcgctgaacaaacgcatggaacaggtggccagcaatgagtcggccactgag
gaggacgacatcgacgtggagttgcgactctcccgctttgaatacctcatggagcgccgg
ctgctgctgcttaatagcgtactgctccgccagaacccgcataatgtgcacgagtggcac
aagcgggtcacactgtacgaagacaagcccgccgagatcatcagcacatacacagaggcc
gtgcagacggtgcagccaaagcaggcggttggcaaactgcacacgctctgggtggagttt
gccaagttctatgaggccaacgggcaggtggaggatgcgcgagtggtctttgaacgcggc
accgaggtggagtacgtcaaggtggaggatctagccgctgtgtggtgcgagtgggccgaa
atggagctccgtcagcagcagttcgaggctgcgcttaagttgatgcagagagccactgcg
acaccgaagcgaaaggttgcctatcacgacgatacggagacggtgcaggcgcgtctccat
cgttcgctgaaagtgtggtccatgtacgccgatctggaggagtcctttggcacctttaag
acctgcaaagcggtctacgaacggataattgacctaaagatctgcacgccgcagataatc
atcaactatggcatgttcctcgaggagcacaactacttcgaagaggcttatcgtgcctat
gagaagggaatcgctctgttcaagtggcccaatgtgtacgacatctggaactcctatctg
agcaagttcctggagcgatatggcggcactaagctagagcgtgcgagggatcttttcgag
cagtgcttggatcagtgtcccgccgagcatgccaagtacttttacctcttgtacgccaag
ctggaggaggaacacggcttggccaggcacgctatgtcagtgtacgatcgcgccacttcc
gctgtaaaggaggatgagatgttcgacatgtacaatatctttgtgaaaaaggcggccgag
atctatggattgccacgtacccgggagatttacgaaaaggccatcgaggcgctgcccgag
cagcacatgcgtcacatgtgcgtcaagttcgcagagttggaaacaaagctgggagaggtg
gatagagccagggccatatacgcccattgctcgcaggtctgcgatccccgcatcaccgcc
gacttctggcagacgtggaaggagttcgaggtgcgtcatggcaacgaggacaccatgcgc
gaaatgctgcgcatcaagcgctccgttcaggccacctacaacacgcaggtcaatatgatg
gccgcccaattcctcaacacaaacaatggcacggctgccgacgctggagctggaacggat
gcaatgcggcagctggaggagaaggcacgccaagcggctgccgaggccaagcagaaaccc
accgagaaggccgcatccaatataatgtttgtgcgcggagaaacgcagggtggggccaag
gacaaaaaggacacggtggtcaatcccgatgagattgacattggcgacagcgacgaggac
gaggaggatgacgacgatgaggcggagaacgagggtgcgaaccaagagaaccaagcagtc
gaggcggcagccacaaaaaccgatgacgagggtctcgtcatgaagaaactgcgcttcgag
caaaaggccatacccgccaaggtctttggcagcctcaagcccaccaatcaaggcgactcg
gatgaggagtga
DBGET
integrated database retrieval system
