Demequina sediminis: GCM25873_01980
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Entry
GCM25873_01980 CDS
T09136
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dss
Demequina sediminis
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dss03400
]
GCM25873_01980
Enzymes [BR:
dss01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GCM25873_01980
DNA repair and recombination proteins [BR:
dss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GCM25873_01980
Prokaryotic type
GCM25873_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDZ60407
LinkDB
All DBs
Position
complement(188381..189706)
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AA seq
441 aa
AA seq
DB search
MTEMWWIRRDARLADNPALLGAQEHGPAAAVFAWTPPIDQWSGRRRAHLARVLSSLREAT
GGAVGIRRDRADNAVLAVAREHDSRVVWASREYSPAGIRAQEAVQRALADDGRELRFVGS
PYAVAPGRVVKNDGDEYRVFTPFSRAWREHGWRAPAHAADPDYLAAVDSDVDLEAEAARG
DSEDPLAEPVEAREAGVLDAWHEFVENGLGAYAAERDRPDLESTSRLSVPLAFGQIHSRT
VLAATGAIRGDAARKFESEVAWREFHADVLFRHPRAQRESLTPVIPEDAWARDDESADAW
AAWRDGRTGYPLVDAGMRELAATGTMHNRVRMVVASFLVKDLHVPWQRGADHFRRALLDY
DHAQNQLNWQWVAGTGRDAAPYFRIFNPESQAAKFDPERRYVRRWISELDTPDYPSPIVD
HATERAASLADFQRGKALRAG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagatgtggtggatccggcgtgatgcacgcctcgcggacaatccggcgctgctc
ggcgcgcaagagcacggccccgcggcggccgtgttcgcgtggacccctccgatcgatcag
tggtcgggacgccgccgcgcgcacctcgcacgcgtgctgtcgagcctgcgcgaggccacc
ggaggggcggtggggatccgccgcgaccgcgcggacaacgccgtgctcgccgtggcacgc
gagcacgactcccgtgtggtgtgggcctcccgcgagtactcccccgcaggaatccgcgca
caggaggccgtgcagcgcgccctcgccgacgacgggcgcgagctgaggttcgtcggttcg
ccgtatgcggtcgcccccggccgtgtggtcaagaatgatggcgacgagtaccgcgtcttc
acgccgttctcgcgtgcgtggcgcgaacacggctggcgcgcccccgcgcacgcggcggac
cccgactacctcgcggcggtcgactcggacgtcgacctggaggccgaggcggcacgcggg
gacagcgaggaccccctggcggaaccggtcgaggcgcgcgaggcgggcgtgctcgacgcg
tggcacgagttcgtcgagaacggcctgggcgcctacgcggccgagcgcgaccgccccgat
ctcgagtcgacgtcgcgactctcggtgccgctcgcgttcgggcagatccactcacgcaca
gtgctggccgcgaccggcgcgatacgcggtgacgccgcgcgcaagttcgagtccgaggtg
gcgtggcgcgagttccacgcggacgtgctcttccgccatccgcgcgcgcaacgcgagtcg
ctcacccccgtgatccccgaggatgcgtgggctcgggacgacgagtccgccgatgcctgg
gccgcctggcgcgacggccggaccggctaccccttggtggatgcggggatgcgcgagctt
gcggcgaccggcaccatgcacaaccgcgtccgcatggtggtcgcatccttcctggttaag
gacctccacgtgccgtggcagcgcggagcggaccatttccgccgcgcactgctcgactac
gaccacgcgcagaaccagctcaactggcagtgggtcgcgggcacggggcgcgatgcggcg
ccgtacttccgtatcttcaatcccgagtctcaggccgcgaagttcgaccccgagcgccgg
tacgtgcggcgctggatctccgaactcgacacgccggactacccctccccgatcgtcgac
cacgccaccgagcgcgcggcctcgctcgcggacttccagcgcggcaaggcgctccgcgcg
ggctga
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