Demequina sediminis: GCM25873_02110
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Entry
GCM25873_02110 CDS
T09136
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dss
Demequina sediminis
Pathway
dss00061
Fatty acid biosynthesis
dss00071
Fatty acid degradation
dss01100
Metabolic pathways
dss01212
Fatty acid metabolism
dss02024
Quorum sensing
dss04146
Peroxisome
Module
dss_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GCM25873_02110
00071 Fatty acid degradation
GCM25873_02110
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GCM25873_02110
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM25873_02110
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dss01004
]
GCM25873_02110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dss04147
]
GCM25873_02110
Enzymes [BR:
dss01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GCM25873_02110
Lipid biosynthesis proteins [BR:
dss01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GCM25873_02110
Exosome [BR:
dss04147
]
Exosomal proteins
Exosomal proteins of breast milk
GCM25873_02110
Exosomal proteins of breast cancer cells
GCM25873_02110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BDZ60420
LinkDB
All DBs
Position
202279..204225
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AA seq
648 aa
AA seq
DB search
MTQNHMAAPGLASIDPAMNLTAMLDSRVAANPSGPFAEVKDDAGAWVPVSLAEFRDRVRA
VAKGLIASGVAAGDRVGIMGDTRIEWSVMDFAVLAAGGIVVPIYPSSSAKQCAWIVEDAG
LSLVAAETEDLRAMLAGLDKAPRVVALTAEGLDALAASGDGVSDADLDARTADVVLTDLA
TIIYTSGTTGRPKGAMLTHRNLVEHAKNVELDSEFGAFVQGDTRVLLFLPLAHVFARYAM
VLALSSGAVIGYTPNHKTLAADLASFRPTWMPLVPRVLETIYNRADAAQTGLKKRIFRWS
AKVARESSMALETGGPSLGLKVRFRIADALVLKKIRALMGGQLGYVLAGGAKLNASIGHF
FRGLGVTVMQGYGLTETTAAHMGTPSTGQVMGTVGHPLAGCEVKLDEDGEILVRGVNLFS
GYWNAPEETAQVMRGDWFATGDLGEIHDGNLTITGRKKEILVLSSGKNIQPAILEDSIRS
HPAIQDSVVIGDGRHFVSAVVTLDPVLLPSWLAAHDLPEMDVATASTHERVRELISRAIA
TANDHVSRAEAIREFRILPREFTEAREEITASLKIRRAVVMENFKDLIESIYSQQKSSPP
AATPNPTRAPPSPAPGHRSGHSVLLRRESRGLRDTEYSPRAATPPASC
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaaccacatggcagcaccggggctcgccagcatcgaccccgcgatgaacctc
accgcgatgctcgactctcgcgtcgcggcgaaccccagcggtcccttcgccgaggtgaag
gacgatgccggggcatgggtccccgtgtcgctcgccgagttcagggatcgggtgcgcgcc
gtggcgaagggcctcatcgcgtccggcgtggccgcgggcgaccgtgtgggcatcatgggc
gacacccgcatcgagtggtccgtgatggacttcgcggtgctcgccgccgggggcatcgtc
gtgcccatctacccgtcgtcgtcggcgaagcagtgcgcgtggatcgtcgaggacgcgggg
ctgtccctggtcgcggcggagaccgaggacctgcgcgccatgctcgcgggcctcgacaag
gctccccgggtggtcgcgctcaccgccgaaggcctcgacgcgctcgccgcctccggtgac
ggcgtctccgacgccgacctcgacgcccgcaccgcggacgtggtgctcaccgacctcgcg
accatcatctacacctcgggcaccacgggccggcccaagggcgcgatgctcacccaccgc
aacctggtcgagcacgcgaagaacgtcgagctcgactccgagttcggcgcgttcgtgcag
ggcgacacgagggtgctgctcttccttcccctcgcgcatgtcttcgcgcgctacgcgatg
gtgctcgcgctgtcctcgggcgccgtgattggctacaccccgaaccataagacgctcgcc
gccgacctcgcgagcttccggcccacgtggatgccgctggtcccgcgcgtgctcgagacg
atctacaaccgcgcggacgccgcccagaccggcctcaagaagcggatcttccgctggtcg
gccaaggtcgcgcgcgagtcttcgatggcgctcgagaccggcggaccgtcgctcgggctg
aaggtgcgcttccggattgccgacgcgctggtgctcaagaagatccgcgcgctcatgggt
gggcagctgggctacgtgctcgcgggcggagccaagctcaacgcgagcatcggccacttc
ttccgcggactgggcgtcaccgtgatgcagggctacggactcacggagaccaccgcagcg
cacatgggaacccccagcaccggccaggtcatgggcaccgtcggccacccgctcgcgggc
tgcgaggtgaagctcgacgaggacggcgagatcctggtcaggggcgtcaacctgttctcg
ggctactggaacgcacccgaggagaccgctcaggtgatgcgcggcgactggttcgcgacg
ggcgacctgggagagatccacgacggcaacctcaccatcacgggtcgcaagaaggagatc
ctggtgctgtcctcgggcaagaacatccagcccgcgatcctcgaggactcgatccgctcg
caccccgcgattcaggactccgtggtgatcggcgacggccgccacttcgtgtccgccgtc
gtgacgctcgacccggtgctgttgcccagctggctcgccgctcacgacctgcccgagatg
gacgtcgcgaccgcctcgacacacgagcgcgtgcgcgagctcatcagccgcgcgatcgcc
acggccaacgatcacgtctcgcgcgccgaggccatccgcgagttccgcatccttccccgc
gagttcaccgaggcccgcgaggagatcacggcctcgctcaagattcgccgggccgtggtc
atggagaacttcaaggacctcatcgagtcgatctactcgcagcagaagtcctcgcccccg
gcggccacgcctaaccccacccgcgccccaccgagccccgcccccggccaccgttcggga
cactcagtactcctccgtcgcgagtctcgcgggctgcgggacactgagtactccccgcgc
gcggcgaccccgcctgcgtcatgctga
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