Demequina sediminis: GCM25873_03300
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Entry
GCM25873_03300 CDS
T09136
Name
(GenBank) putative ATP-binding protein ABC transporter CydC
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
dss
Demequina sediminis
Pathway
dss02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCM25873_03300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dss02000
]
GCM25873_03300
Transporters [BR:
dss02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
GCM25873_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
ABC_membrane
AAA_22
NB-ARC
AAA_30
SMC_N
AAA_29
AAA_19
NACHT
MobB
RsgA_GTPase
NTPase_1
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BDZ60539
LinkDB
All DBs
Position
complement(306222..307880)
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AA seq
552 aa
AA seq
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MSAGDVRVDWRALREAVRDTGLRAWPLTRAVLAGTVALGSAVGLSAVAAWLIAKAAQMPS
PADVALAATIVRTFGVSRGLFRYLERLASHDAALRGVVTLRERVYDRLAGSGARTVMGLR
RGDIVARMGGDLDAVGDVVVRALIPLGVAVTVSAISIAIVAVLLPLAGVVLAACLLAAGL
VPAVLTLRSARIAAVEGTKARAEVTAAALSAMDGATEHRVWGTSSAAARALRDADADAEH
AHELAARPAAWAVGAQSLFSGIALVALVGLGVLAVRAGDLEGPLAAIVALLPLAAFEAVG
AVPTAVMQLFRSATAAHRLRSLTPAEGEATADATPASSPSTSPATLELRDLRAAWPGMTP
TRPVTATVPPGGVLAIVGRSGIGKTTLLTTIAGALEPAGGAALLGGAVVTPAHTGHAIAM
TAEDAHVFGTTVLENLRVARGSVTEDEAWDVLELVGLAPWVRSLPAGLDTELGADGRSVS
GGERRRLLLARTALAPAPVLLVDEPAEHLDAAGALALRALVSRVRGEGRTVVLVTHDLAL
LDIADQVVSLDG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggagacgtgcgcgtcgactggcgcgcgctgcgcgaggccgtgcgtgacacg
ggcctgcgcgcgtggccgctcacgcgcgcggtgctcgcgggaaccgtcgcgctcggctcg
gcggtcggcctgtccgcggtcgcggcgtggctcatcgccaaggccgcccagatgccctcc
cccgccgatgtcgcgctggccgcgaccatcgtgcgcaccttcggcgtctcgcgcgggctc
ttccgctatctcgagcgcctcgcctctcacgacgccgcgctgcgcggcgtggtgacgctg
cgcgaacgcgtctacgaccgcctcgcaggctcgggggcgcgcaccgtcatgggcctgcgc
cgcggcgacatcgtcgcgcgcatgggcggcgacctcgacgccgtgggcgacgtggtcgta
cgcgcgctgattccgctcggcgtcgcggtgacggtgtccgcgatctcgatcgcgatcgtc
gccgtgctgctgcccctcgccggggtcgtgctcgcggcgtgcctgctcgccgccgggctg
gtccccgcagtgctgaccctgcgctccgcacgtatcgcggccgtcgagggcactaaggcg
cgggccgaggtcaccgcggccgcgctgtccgcgatggacggcgcgaccgagcaccgcgtg
tggggcacctcctccgccgccgcacgggccttgcgcgacgcggacgccgatgccgagcac
gcccatgagctcgccgcgcggcccgcggcgtgggccgtcggggcgcagtcgctgttctcc
gggatcgccctcgtggcgctcgtgggactcggcgtgctcgcggtgcgggcgggcgacctc
gagggcccgctcgcggcgatcgtcgcgctgctgcccctcgcggccttcgaggcggtgggc
gcggtgccgaccgcggtgatgcagctcttccgctccgcgacggccgcgcaccgcctgcgc
tccctcacccctgccgagggcgaggcgaccgcggacgccaccccggcatcgtccccctcc
acctcccccgccacgctggaactgcgcgacctgcgggccgcctggcccggcatgacgccc
acccggcccgtgacggcgaccgttccgccgggaggcgtgctcgcgatcgtgggccgctcc
gggatcggcaagaccacgctgctcaccacgatcgccggcgcgctcgagcccgcaggcggc
gcggcgctgctgggcggagccgtcgtgacgcctgcgcacacggggcacgcgatcgccatg
accgcggaggacgcgcacgtgttcggcaccacggtgctcgagaacctgcgcgtcgcgcgc
ggatcggtcacggaggacgaggcgtgggacgtgctcgagctcgtcgggctcgcgccgtgg
gtgcggtcgcttcccgccggcctcgacacggagctgggcgcggacggacggtccgtctcg
ggcggtgagcggcgccggctgctgctggcccgcacggcgctcgcccccgcgccggtgctg
ctggtcgacgagcccgcggagcacctcgacgcggcgggcgctctcgcgctgcgcgcgctg
gtgtcacgggtgcgcggggaaggccgtacggtagtcctcgtcactcacgacctcgcgctg
ctcgacatcgctgaccaggtggtgagcctcgatggctga
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