Demequina sediminis: GCM25873_03320
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Entry
GCM25873_03320 CDS
T09136
Symbol
cydB
Name
(GenBank) cytochrome c oxidase assembly protein
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
dss
Demequina sediminis
Pathway
dss00190
Oxidative phosphorylation
dss01100
Metabolic pathways
dss02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GCM25873_03320 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GCM25873_03320 (cydB)
Enzymes [BR:
dss01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
GCM25873_03320 (cydB)
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Gene cluster
GFIT
Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
BDZ60541
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All DBs
Position
complement(309497..310537)
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AA seq
346 aa
AA seq
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MDLALVWFILIAVLWTGYLVLEGFDFGVGMLMPIVGKTNRGRRVALNTIGPVWDGNEVWL
LTAGGATFAAFPEWYATLFSGFYLPLLLILLALIVRAVAIEYRGKINDESWRNRWDWVII
ISAWVPSILWGVAFANLVRGVPLDADHQFIGNFFTLLNPFALLGGVVTLVLFLSHGAIFL
SLKTGGVIRERSEAVARRMSLAAIVVAGVWAVWAQLAYSRNTWTWAAVALAAVALVAAWG
STLKGRFGWAFTANAVAIVGAVVLIFGAMYPNVMPASNDVANSLTIDNASSTDYTLMVMT
WVAVILTPIVLAYQAWSYWVFRRRLSEHDIPEHNELTFAAKSETSA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgcactcgtctggttcatcctcatcgcggtcctgtggaccggctacctggtc
ctcgagggcttcgacttcggcgtcggcatgctcatgccgatcgtcggcaagaccaaccgc
ggccgccgcgtcgcgctcaacacgatcggccccgtgtgggacggcaacgaggtctggctc
ctcaccgcgggcggcgcgaccttcgcggcgttccccgagtggtacgcgaccctgttctcg
ggcttctacctgccgcttctactcatcctgctcgcgctgatcgtgcgcgccgtggcgatc
gagtaccgcggcaagatcaacgacgagtcctggcgcaaccgctgggactgggtcatcatc
atctccgcgtgggtgccgtcgatcctgtggggcgtcgcgttcgcgaacctcgtgcgcggc
gtgcctctcgacgccgaccaccagttcatcgggaacttcttcacgctgctcaacccgttt
gccctgctgggcggcgtggtgacgctagtgctgttcctctcgcacggcgcgatcttcctg
tcgctcaagacgggcggggtgatccgcgagcggtccgaggccgtcgctcgacgcatgtcg
ctcgcggcgatcgtggtcgccggcgtgtgggccgtgtgggcgcagctcgcctactcgcgc
aacacgtggacctgggcggccgtggcgctcgccgccgtcgcgctggtcgcggcctgggga
tccacgctcaagggtcgcttcgggtgggcgttcaccgcgaacgccgtcgcgatcgtcggc
gccgtcgtgctgatcttcggcgcgatgtaccccaacgtcatgcccgcgtccaacgacgtc
gcgaactcgctcacgatcgacaacgcgtcgtcgacggactacacgctcatggtgatgacg
tgggtcgcggtgatcctcacgcccatcgtgctcgcttaccaggcgtggagctactgggtc
ttccgccgtcgcctgtccgagcacgacatcccggagcacaacgagctcaccttcgcggcg
aagtcagagacctccgcctag
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