KEGG   Demequina sediminis: GCM25873_04350
Entry
GCM25873_04350    CDS       T09136                                 
Name
(GenBank) hypothetical protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
dss  Demequina sediminis
Brite
KEGG Orthology (KO) [BR:dss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dss03400]
    GCM25873_04350
DNA repair and recombination proteins [BR:dss03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     GCM25873_04350
SSDB
Motif
Pfam: HerA_C bPH_2 DUF87 TrwB_AAD_bind AAA_22 ResIII FtsK_SpoIIIE AAA_16 Yip1 AAA_30 CFAP143 AAA_25 AAA_19 bPH_3 CbiA AAA_6 AAA_7 AAA_10 Zeta_toxin
Other DBs
NCBI-ProteinID: BDZ60644
LinkDB
Position
complement(399783..401987)
AA seq 734 aa
MGYPRTLLAPDEEIVVDSHPHWKALIGPVIVAALAVAAAVVAGMLVTGSDLTDTTQTVIG
IAIGVILAIVVIWWGIAPFIRWFTTHFVITDRRVIFRTGVLTKTGIDIPLARVNTVQFRH
GLIDRMLRTGTLIIESASDDPLEFEDIPHVERVHAQLYHQVFDTIDREDGPARPTTPLPP
DPLAARRASSLPTLGSMSEPNGPDHAAAVAAGYTFDGPSITLGALVQGGAGNPAAQVRLP
LAMMNRHGLIAGATGTGKTRTLQGLAESLSDAGVPVFVTDIKGELSGMAVAGEAKDFIAT
RAADIGQEWEPRAYPVEFYALGEAAAGTGLPLRTTVTDFGPLLLAKVLGLTDVQESALGL
VFHWADTNGLALLDLKDLRAVIAHLTSDEGKAELKTIGGVSTQTAGVLLREIANLQAQGG
DEFFGEPAFDTTDLLRLAPDGRGIISALELPRLLDHPQLFSTFLMWLLADLFADLPEVGD
ADKPRLVFFFDEAHLLFADASKEFLAQVTQTVRLIRSKGVGVFFCTQTPKDVPADVLGQL
GSRIQHALRAFTPDDAAAMRATARTFPNSPYDLEEVLTTMGIGEAVVTVLSDKGAPTPVA
WTRLCAPRGLMDPAPAQVVAEAVVASPLAPRYATAVDRESAYEMLTARAAKAASREPGPS
AGSSSGPSSGSSSGSPRGSSSGSSSKSSSGSSRRSEKSGVEQVLESAPVRDFARTAGREI
GRSILRSVLGVLKR
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgggatacccgcgcacgctgcttgcccccgacgaggagatcgtcgtcgacagccacccc
cactggaaggctctgatcggccccgtgatcgtggcggccctcgcggtcgcggcggccgtc
gtggccggcatgctcgtgacgggatcggacctcacggacaccacgcagaccgtgatcggc
atcgcgatcggcgtgatcctcgcgatcgtggtcatctggtggggcatcgctccgttcatt
cgctggttcaccacgcacttcgtcatcacggaccgccgcgtgatcttccgcaccggcgtg
ctgaccaagaccggcatcgacatcccgctcgctcgcgtcaacacggtgcagttccgccac
ggcctcatcgaccgcatgctgcgcaccggcacgctcatcatcgagtccgcgtccgacgac
cccctggagttcgaggacatcccccacgtcgagcgcgtccacgcgcagctttaccaccag
gtctttgacaccatcgaccgcgaggacgggcccgcaaggcccaccactcccctcccgcct
gatccgctcgccgcgcgccgggcatcgtccctccctacattggggagcatgagcgaaccg
aacggtcccgaccacgccgcggcggtggccgcgggctacaccttcgacggtccgtcgatc
acgctcggcgcgctcgtgcagggcggagccggcaaccccgcggcacaggtgcgcctccca
ctcgcgatgatgaaccgccacggactcatcgcgggggcgacagggacgggcaagacgcgc
acgctgcagggcctcgccgagtcgctgtccgatgccggggtgccggtcttcgtgacggac
atcaagggcgaactgtcgggcatggcggtcgcgggcgaggccaaggacttcatcgccacg
cgagccgccgacatcggccaggagtgggagccgcgcgcctaccccgtcgagttctacgcg
ctgggagaggccgccgccggcacggggctgccgctgcgcacgaccgtcaccgacttcggg
ccgctgctgctcgcaaaggtgctgggcctcaccgacgtccaggaatccgcattggggctg
gtgttccactgggcggacaccaacgggctcgcgctgctcgacctcaaggacctgcgcgcc
gtgatcgcgcacctcacgtccgacgagggcaaggcggagctcaagacgatcggcggggtg
tcgacgcagacggcgggcgtgctgctgcgcgagatcgcgaatcttcaggcccagggcggc
gacgagttctttggcgagccggccttcgacaccacggatctgctgcggctcgcgcccgac
ggcaggggcatcatctccgcgctcgagctgccgcgcctgctcgaccacccgcagctgttc
tcgacgttcctcatgtggctgctcgcggacctgttcgccgacctccccgaggtgggcgac
gcggacaagccgcgcctcgtgttcttcttcgacgaggcacacctgctgttcgccgatgcg
tccaaggagttcctcgctcaggtcacccagacggtgcggctcatccgctcgaagggcgtg
ggcgtgttcttctgcacacagacccccaaggacgtgccggccgatgtcctgggccagctg
ggttcacgcatccaacacgcgctgcgcgcgttcactccggacgatgccgcggccatgcgg
gcgaccgcgcgcaccttcccgaattcgccgtacgacctcgaggaggtgctcacgacgatg
ggtatcggcgaggcggtggtgacggtgctgagcgacaagggagcgccgaccccggtcgcg
tggacgcggctgtgcgcgccgcgcgggctcatggatcccgcgcccgctcaggtggtagcc
gaggccgtggtggcctctccgctcgcgccgcgctatgcgacggccgtggatcgcgagagc
gcgtacgagatgctgaccgcgcgggccgcgaaggccgccagccgcgagcccgggccttcc
gccgggtcctcttccgggccctcttccgggtcctcttccgggtctccccgcggctcctcc
tccgggtcctcttccaagtcctcctcggggtcctcccgccgctccgagaagtcgggcgtc
gagcaggtgctcgagtcggcgccggtgcgcgacttcgcgcgcaccgcggggcgcgagatc
ggccggtcgatcctgcggtccgtccttggcgtgctcaaacgttga

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