Demequina sediminis: GCM25873_05650
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Entry
GCM25873_05650 CDS
T09136
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
dss
Demequina sediminis
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dss03000
]
GCM25873_05650
Transcription factors [BR:
dss03000
]
Prokaryotic type
Helix-turn-helix
LacI family
GCM25873_05650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_Tnp_ISL3
DUF7443
Motif
Other DBs
NCBI-ProteinID:
BDZ60774
LinkDB
All DBs
Position
complement(523792..524829)
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AA seq
345 aa
AA seq
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MATIQRVAELAGVSTATVSRALAGKSTVSAATRQRVEDAARQLGYVASATASSLASGRTR
NVGMVMPFLGSWYYASVLKGAHRALADAGYDLTLYHLEDTTRHPRRRQRLFEEFLMRKRV
DAFIAVSLELTAEELTRIHDLGKPMVGLGGPLEDVTTLSIDDRAVAELATSHLTSLGHRR
IAYIGGSEGFDLDFHMPAHRRQGYEDALIAVGVTPDPAMRLAADFTIQGGHQATLQILGD
PRLRPTAIFAASDEMAIGAVLAARSLGLRVPEDLSVVGIDGHELGAFFELTTVDQHPVEQ
GRLAALALLAELRQDTAAEGHANRALPYNLHVRKSTAVPPVRRRD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacgatccagcgggtcgcggaactggcgggcgtctcgacggcgaccgtctcgcgc
gccctcgcgggcaagtcgacggtctcagccgctacgcgccagcgggtcgaggatgccgcg
cggcaactgggctacgtcgcctccgcgacggcatcgtcgctcgcctccggccgcacccgc
aacgtgggcatggtgatgcccttcctgggcagctggtactacgcgagcgttctcaagggc
gcgcaccgcgcgctcgccgacgcgggctacgacctcacgctctatcacctcgaggacacg
acgcggcatccgcgcaggcgacagcgcctgttcgaggagttcctcatgcgcaagcgcgtg
gacgcgttcatcgcggtctcgctcgagctcaccgccgaggaactcacgcgcatccacgac
ctgggcaagcccatggtgggtctcggcggtccgctcgaggacgtcacgacgctcagcatc
gacgaccgcgccgtcgccgagctcgcgacctcgcacctcacctcgctgggccaccgccgc
atcgcgtacatcggcggctccgagggcttcgacctcgacttccacatgcccgcccaccgg
cgccagggctacgaggacgcgctcatcgccgtgggggtcaccccggatcccgcgatgcgc
ctcgcggccgacttcacgatccagggcggccaccaggcgacgctgcagatcctgggcgac
cctcgcctgcgccccaccgcgatcttcgcggcatcggacgagatggcgatcggcgcggtc
ctcgcggcgcgctcgctcggcctgcgcgtccccgaggacctgtcggtggtcggcatcgac
ggacacgagttgggcgcgttcttcgagctcaccacggtggaccagcatcccgtcgaacaa
ggccggctcgcggcgctcgcgctgctcgccgagctgcgccaggacacggcggccgagggt
catgccaaccgcgcactcccgtacaacctgcacgtgcgcaagtccacggccgtcccgccg
gtgcgacggcgtgactga
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