Demequina sediminis: GCM25873_06380
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Entry
GCM25873_06380 CDS
T09136
Name
(GenBank) hypothetical protein
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
dss
Demequina sediminis
Pathway
dss00900
Terpenoid backbone biosynthesis
dss00997
Biosynthesis of various other secondary metabolites
dss01100
Metabolic pathways
dss01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GCM25873_06380
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
GCM25873_06380
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dss01006
]
GCM25873_06380
Enzymes [BR:
dss01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
GCM25873_06380
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
GCM25873_06380
2.5.1.29 geranylgeranyl diphosphate synthase
GCM25873_06380
Prenyltransferases [BR:
dss01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
GCM25873_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDZ60847
LinkDB
All DBs
Position
complement(594450..595427)
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AA seq
325 aa
AA seq
DB search
MAPAGPAAAEIADRLTRSAEGGKAFRGRLLLAAFEACGGVDRDAAIELAAAVELFQTAAL
IHDDVLDGSDTRRGRPSAHRAFEALHRDAGWHGDPAAYGRSGAILSGDVALVAAQRGATL
AARRVGDVVADLFDEMAVLVTAGQHLDMRVAVSPLAALPGLEGDIRATMRAKTASYTAEF
PLALGAAAAGADPDIVAAVREAGVPLGVAFQLRDDILGVAGSPAVTGKPVGDDLREGKRT
LLVWHAATRGDDAQREAVLSVLGRADATASDIEAAITAIEASGAYAFVEAEIAAHAAAAR
TGLRDALARPVAVLDLVDAAVDRVA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcgggaccggcggcggcggagattgcggatcgcctcacccgctcggccgag
ggcggcaaggccttccgcgggcggctcctgctcgcggccttcgaggcgtgtggaggggtg
gatcgcgacgctgccatcgagctcgccgcggccgtcgagctcttccagacggcggccctc
attcacgacgatgtcctcgacggctcggacacccgtcgcgggcggccctccgctcaccgc
gccttcgaggcgctccaccgcgacgcggggtggcacggcgaccccgcggcctacggacgg
tccggcgcgatcctttcgggcgatgtcgcgctcgtcgccgctcagcgcggcgcgacactc
gccgcgcgccgcgtcggcgacgtggttgccgacctcttcgacgagatggcggtgctggtc
accgccggccagcacctcgacatgcgtgtcgcggtgtcaccgctcgccgccctgccgggc
ctcgagggcgacattcgcgccacgatgcgcgccaagacggcgtcctatacggccgagttc
ccgctcgcgctcggtgccgccgcggcgggagccgaccccgacatcgtcgcggcagtgcgg
gaggcgggggttccgctcggggtggcgttccagctccgcgacgacatcctgggtgttgcg
ggatcccccgcggtcaccggcaagcccgtcggcgacgacctgcgcgagggcaagcgcacc
ctgctcgtgtggcacgcggccacgcgaggcgacgatgcgcagcgcgaggccgtactgagc
gtgctcggccgcgcggacgccacggcgagcgacatcgaggcggcgatcaccgcgatcgaa
gcctcgggcgcctatgcgttcgtcgaggccgagatcgcggctcatgccgccgcggcgcgg
acgggcctccgtgacgcgctcgcgcggccggtggccgtgctcgacctggtcgacgcggcg
gtcgaccgcgtcgcgtaa
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